RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 BCAS2O75934 225 aaPredicted RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 SEMA3DO95025 777 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ANXA4P09525 319 aaPredicted RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 THEGLP0DJG4 465 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ERGP11308 486 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 BCKDHAP12694 445 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 HSD17B1P14061 328 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 CAPN3P20807 821 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 IL10P22301 178 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 PKLRP30613 574 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 TIA1P31483 386 aaKnown RBP eCLIP4.27□□□□□ -1.73
VPS29-212ENST00000621131 ACSL1P33121 698 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 HSPA13P48723 471 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SLC7A2P52569 658 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 CLDN8P56748 225 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 STARD6P59095 220 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 REEP5Q00765 189 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 FAM174BQ3ZCQ3 159 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 CCSMST1Q4G0I0 132 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 RFTN2Q52LD8 501 aaPredicted RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 PIGGQ5H8A4 983 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 GCNT6Q5T4J0 391 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SPINK14Q6IE38 97 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 NOXRED1Q6NXP6 359 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 KLHL35Q6PF15 583 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SUSD1Q6UWL2 747 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 TMIGD1Q6UXZ0 262 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 WASH2PQ6VEQ5 465 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 GCNT7Q6ZNI0 430 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 Q6ZSR6 202 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 IKBIPQ70UQ0 350 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 PXKQ7Z7A4 578 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ABI3BPQ7Z7G0 1075 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SPATA24Q86W54 205 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 NUDT13Q86X67 352 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 HPS6Q86YV9 775 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 TMEM126BQ8IUX1 230 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 TRIML2Q8N7C3 387 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 NAXEQ8NCW5 288 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 OR7G3Q8NG95 312 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 OR8J3Q8NGG0 315 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 OR9I1Q8NGQ6 314 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 FGFBP3Q8TAT2 258 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 FAM222BQ8WU58 562 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 LCN9Q8WX39 176 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 TESCQ96BS2 214 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 MTERF3Q96E29 417 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SGK494Q96LW2 274 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 PPM1MQ96MI6 270 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 TSSK3Q96PN8 268 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 GBP5Q96PP8 586 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 OR52E6Q96RD3 313 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 HBEGFQ99075 208 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 DDOQ99489 341 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ECSITQ9BQ95 431 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 GPR174Q9BXC1 333 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 NLNQ9BYT8 704 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 ROGDIQ9GZN7 287 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SRMSQ9H3Y6 488 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 PLK3Q9H4B4 646 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 Q9H521 79 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 CLMPQ9H6B4 373 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 COPS7BQ9H9Q2 264 aaPredicted RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 S100A14Q9HCY8 104 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 RPS10P5Q9NQ39 176 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 MIEF1Q9NQG6 463 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 FARSBQ9NSD9 589 aaKnown RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 FAM120CQ9NX05 1096 aaKnown RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 OR6C2Q9NZP2 312 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 NPAP1Q9NZP6 1156 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 FLRT3Q9NZU0 649 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 C6orf203Q9P0P8 240 aaPredicted RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 ANKMY1Q9P2S6 941 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SLC23A2Q9UGH3 650 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 CIDEBQ9UHD4 219 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 PLAGL1Q9UM63 463 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 PCDHGB4Q9UN71 923 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 SNX7Q9UNH6 387 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 POMPQ9Y244 141 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 WBP11Q9Y2W2 641 aaKnown RBP4.27□□□□□ -1.73
VPS29-212ENST00000621131 CMAHPQ9Y471 501 aa4.27□□□□□ -1.73
VPS29-212ENST00000621131 A0A096LPI6 279 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 TRBC2A0A5B9 178 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 C2orf74A8MZ97 194 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 RFXANKO14593 260 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 SCAMP2O15127 329 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 NDUFS4O43181 175 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 OR1F1O43749 312 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 HS6ST1O60243 411 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 OR2C1O95371 312 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 SERPIND1P05546 499 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 UMPSP11172 480 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 F3P13726 295 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ANPEPP15144 967 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 SDC1P18827 310 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 EPORP19235 508 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 TCN1P20061 433 aaPredicted RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 RPS9P46781 194 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 TRPC1P48995 793 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 HNRNPFP52597 415 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms