RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 OR1F2PQ96R84 312 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ZDHHC5Q9C0B5 715 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TREM1Q9NP99 234 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 LHX9Q9NQ69 397 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 POT1Q9NUX5 634 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 ICKQ9UPZ9 632 aa6.44□□□□□ -1.38
NEDD9-216ENST00000620854 TCF20Q9UGU0 1960 aaKnown RBP6.44□□□□□ -1.38
NEDD9-216ENST00000620854 MEIKINA0A087WXM9 373 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 hCG_1807616A0A1W2PRN6 198 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 IDSB3KWA1 339 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 B4DGG1 531 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 C11orf98E9PRG8 122 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 VEGFDO43915 354 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 PEX14O75381 377 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 RBMXL2O75526 392 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 RENP00797 406 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CFIP05156 583 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 DRD2P14416 443 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 IL12BP29460 328 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 AKR1C2P52895 323 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 AKR1C1Q04828 323 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 GXYLT1Q4G148 440 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 FAM74A1Q5RGS3 127 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ELP2Q6IA86 826 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ZC3H14Q6PJT7 736 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 THSD4Q6ZMP0 1018 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 FCRLAQ7L513 359 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 NRSN1Q8IZ57 195 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 LINC00471Q8N535 108 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR13C2Q8NGS9 318 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR6N2Q8NGY6 317 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 SUN3Q8TAQ9 357 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 NSMAFQ92636 917 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 FGF11Q92914 225 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 PTP4A1Q93096 173 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 MARC2Q969Z3 335 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 SLC22A18Q96BI1 424 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 S100A16Q96FQ6 103 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR7D2Q96RA2 312 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF649Q9BS31 505 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 MS4A8Q9BY19 250 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 TBL1XR1Q9BZK7 514 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 SLC2A4RGQ9NR83 387 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ASB6Q9NWX5 421 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 SNRNP200O75643 2136 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 TOR1AO14656 332 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 THY1P04216 161 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 FBXO45P0C2W1 286 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 DCTDP32321 178 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 GABRA3P34903 492 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 BEX5Q5H9J7 111 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 RAB12Q6IQ22 244 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF620Q6ZNG0 422 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 PARS2Q7L3T8 475 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 UBE2Q1Q7Z7E8 422 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 TMPRSS12Q86WS5 348 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 IL17RCQ8NAC3 791 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 INO80EQ8NBZ0 244 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR51Q1Q8NH59 317 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR56B4Q8NH76 319 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CNOT9Q92600 299 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 JSRP1Q96MG2 331 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 TEAD3Q99594 435 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR8D2Q9GZM6 311 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CST11Q9H112 138 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 NOX3Q9HBY0 568 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR2S2Q9NQN1 319 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OBP2AQ9NY56 170 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 MRTO4Q9UKD2 239 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 PRUNE2Q8WUY3 3088 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 GVINP1Q7Z2Y8 2422 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 TRIOO75962 3097 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 A0A087WV48 116 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 KANTRA0A1W2PQU2 76 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 WRBO00258 174 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 TACSTD2P09758 323 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 NFYAP23511 347 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CXCR1P25024 350 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 AK4P27144 223 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CERS1P27544 350 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 MESP2Q0VG99 397 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CRMP1Q14194 572 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 GPNMBQ14956 572 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF77Q15935 545 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 RPE65Q16518 533 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OTPQ5XKR4 325 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR4C11Q6IEV9 310 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 MEPCEQ7L2J0 689 aaKnown RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 GPAT4Q86UL3 456 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 CMTM4Q8IZR5 234 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 DEFB119Q8N690 84 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR4K13Q8NH42 304 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 OR52N1Q8NH53 320 aa6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ACOT11Q8WXI4 607 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF707Q96C28 371 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-216ENST00000620854 PEX11GQ96HA9 241 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms