RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 P2RX1P51575 399 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 BTN1A1Q13410 526 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 ZAR1Q86SH2 424 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 OR6M1Q8NGM8 313 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 ZCCHC10Q8TBK6 192 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 NT5CQ8TCD5 201 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 CNOT9Q92600 299 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 RIT1Q92963 219 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 AIFM2Q9BRQ8 373 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 SHARPINQ9H0F6 387 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 PHPT1Q9NRX4 125 aaPredicted RBP17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 C2orf42Q9NWW7 574 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 PDCD5O14737 125 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 GPRIN2O60269 458 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 SUSD5O60279 629 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 CREBL2O60519 120 aaPredicted RBP17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 IL5P05113 134 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 CEACAM5P06731 702 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 EPCAMP16422 314 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 DCTDP32321 178 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 MECP2P51608 486 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 FAM122CQ6P4D5 195 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 NHLRC1Q6VVB1 395 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 OVCH2Q7RTZ1 564 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 ZNF433Q8N7K0 673 aaPredicted RBP17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 OR14A16Q8NHC5 309 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 RPS4Y2Q8TD47 263 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 TOX2Q96NM4 488 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 PTCHD1Q96NR3 888 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 CD93Q9NPY3 652 aa17.98■□□□□ 0.47
PDLIM3-212ENST00000620787 SCAMP1O15126 338 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 ADAM11O75078 769 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 B3GALNT1O75752 331 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 PAK4O96013 591 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 RPS15AP62244 130 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 RPS15P62841 145 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 HLXQ14774 488 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 DEFB134Q4QY38 66 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 PWWP2BQ6NUJ5 590 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SYNPRQ8TBG9 265 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 ST8SIA4Q92187 359 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 RGP1Q92546 391 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 OR5V1Q9UGF6 321 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 DAPP1Q9UN19 280 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 GXYLT2A0PJZ3 443 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SNRPGP15A8MWD9 76 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SELENOFO60613 162 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SERPINI2O75830 405 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 NDUFB6O95139 128 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 TMEM69Q5SWH9 247 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 ARSKQ6UWY0 536 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SHISA5Q8N114 240 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SLC43A2Q8N370 569 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 ESX1Q8N693 406 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 CDRT4Q8N9R6 151 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 LRFN5Q96NI6 719 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 SERINC2Q96SA4 455 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 STACQ99469 402 aa17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 GPN1Q9HCN4 374 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-212ENST00000620787 IDSB3KWA1 339 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 P2RX6O15547 441 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 BRINP1O60477 761 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 SMIM10L1P0DMW3 83 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 ILF3Q12906 894 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 S100A16Q96FQ6 103 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 SMIM10Q96HG1 83 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 WSB2Q9NYS7 404 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 TAS2R10Q9NYW0 307 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 SERGEFQ9UGK8 458 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 FBXL21Q9UKT6 434 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 MRPS23Q9Y3D9 190 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 IER3IP1Q9Y5U9 82 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 SESN1Q9Y6P5 492 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 V9GY05 133 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 A8MXK9 166 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 MCIDASD6RGH6 385 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 TSPAN9O75954 239 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 GNRH1P01148 92 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 LPLP06858 475 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 CSF2RAP15509 400 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 CDK2P24941 298 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 DIO1P49895 249 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 NOGQ13253 232 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 CSRP2Q16527 193 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 OR4E2Q8NGC2 313 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 C1orf216Q8TAB5 229 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 SP7Q8TDD2 431 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 KIR3DX1Q9H7L2 352 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 SLC22A7Q9Y694 548 aa17.96■□□□□ 0.47
PDLIM3-212ENST00000620787 LRRC72A6NJI9 287 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 POM121CA8CG34 1229 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ATP6V1G2-DDX39BF2Z307 99 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 SNAPC5O75971 98 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 TLX1P31314 330 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 MAP3K8P41279 467 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 RBM34P42696 430 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 KIAA1024LP59773 190 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 NANOS3P60323 173 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 SEC61A1P61619 476 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms