RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 INTS11Q5TA45 600 aaKnown RBP14.16□□□□□ -0.14
BRCA1-228ENST00000618469 PAQR6Q6TCH4 344 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 C22orf34Q6ZV56 151 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 PATL1Q86TB9 770 aaKnown RBP14.16□□□□□ -0.14
BRCA1-228ENST00000618469 RANBP3LQ86VV4 465 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-228ENST00000618469 PRIMA1Q86XR5 153 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 RNF217Q8TC41 542 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 PIK3IP1Q96FE7 263 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 SH3GL1Q99961 368 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 ECSITQ9BQ95 431 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 REPIN1Q9BWE0 567 aaKnown RBP14.16□□□□□ -0.14
BRCA1-228ENST00000618469 PRR14Q9BWN1 585 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 TRIM2Q9C040 744 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 NSRP1Q9H0G5 558 aaKnown RBP14.16□□□□□ -0.14
BRCA1-228ENST00000618469 GID8Q9NWU2 228 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 GPR52Q9Y2T5 361 aa14.16□□□□□ -0.14
BRCA1-228ENST00000618469 FN1P02751 2386 aaKnown RBP14.15□□□□□ -0.14
BRCA1-228ENST00000618469 A0A1W2PPR1 153 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 DEFB108AA8MXU0 73 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 M0QX08 132 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 GPR171O14626 319 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 CCDC22O60826 627 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 NPPAP01160 153 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 IGHV3-9P01782 118 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 THBDP07204 575 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 GTF2E2P29084 291 aaKnown RBP14.15□□□□□ -0.14
BRCA1-228ENST00000618469 GZMMP51124 257 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 C6orf89Q6UWU4 347 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 CASP12Q6UXS9 341 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 Q6ZT83 130 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 WFDC8Q8IUA0 241 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 TMEM99Q8N816 258 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 LSMEM1Q8N8F7 131 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 STEAP2Q8NFT2 490 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 GPR32P1Q8NGA4 272 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 STK35Q8TDR2 534 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 SLC26A7Q8TE54 656 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 KISS1RQ969F8 398 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-228ENST00000618469 APH1AQ96BI3 265 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 S100PBPQ96BU1 408 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 TAMM41Q96BW9 452 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 ELAC2Q9BQ52 826 aaKnown RBP14.15□□□□□ -0.14
BRCA1-228ENST00000618469 WFDC6Q9BQY6 131 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 C12orf10Q9HB07 376 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 SELENONQ9NZV5 590 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 SLC9A8Q9Y2E8 581 aa14.15□□□□□ -0.14
BRCA1-228ENST00000618469 AQP7P3A6NL99 342 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 NPIPB7O75200 414 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 LYZL6O75951 148 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 FOSL1P15407 271 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 LSP1P33241 339 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 RPS5P46782 204 aaKnown RBP14.14□□□□□ -0.15
BRCA1-228ENST00000618469 GYS2P54840 703 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 EGR4Q05215 589 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 P2RY6Q15077 328 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 DUSP7Q16829 419 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 SFRP5Q5T4F7 317 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 ALKBH2Q6NS38 261 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 PAMR1Q6UXH9 720 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 CLEC9AQ6UXN8 241 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 GPAT4Q86UL3 456 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 CALHM3Q86XJ0 350 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 UBE2J2Q8N2K1 259 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 VANGL1Q8TAA9 524 aaPredicted RBP14.14□□□□□ -0.15
BRCA1-228ENST00000618469 DNAJA4Q8WW22 397 aaPredicted RBP14.14□□□□□ -0.15
BRCA1-228ENST00000618469 ARHGDIGQ99819 225 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 PTDSS2Q9BVG9 487 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 OR10A4Q9H209 315 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 EVA1AQ9H8M9 152 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 TMEM27Q9HBJ8 222 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 USP22Q9UPT9 525 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 FLVCR1Q9Y5Y0 555 aa14.14□□□□□ -0.15
BRCA1-228ENST00000618469 A0A0B4J2E0 115 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 A0A1B0GX12 115 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 FAM220BPB1ANY3 271 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 MRPL33O75394 65 aaKnown RBP14.13□□□□□ -0.15
BRCA1-228ENST00000618469 LGI1O95970 557 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 PNMTP11086 282 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 COX4I1P13073 169 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 COX5AP20674 150 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 CD247P20963 164 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 PTNP21246 168 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 GNGT1P63211 74 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 ITGADQ13349 1161 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 SLC17A1Q14916 467 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 OR1Q1Q15612 314 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 NRF1Q16656 503 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 FAM91A1Q658Y4 838 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 ERICH5Q6P6B1 374 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 ULK3Q6PHR2 472 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 BHLHA15Q7RTS1 189 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-228ENST00000618469 BIVMQ86UB2 503 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 OR9K2Q8NGE7 335 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 RP9Q8TA86 221 aaKnown RBP14.13□□□□□ -0.15
BRCA1-228ENST00000618469 SLC38A4Q969I6 547 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 SLC25A36Q96CQ1 311 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 KTI12Q96EK9 354 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-228ENST00000618469 HS3ST6Q96QI5 342 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 ALPK1Q96QP1 1244 aa14.13□□□□□ -0.15
BRCA1-228ENST00000618469 MCHR1Q99705 422 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms