RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 LSM11P83369 360 aaKnown RBP eCLIP20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 GRM7Q14831 915 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 TSC22D1Q15714 1073 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 TRIM61Q5EBN2 209 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 PRAMEF8Q5VWM4 474 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 PRAMEF7Q5VXH5 474 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 ATRAIDQ6UW56 229 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 FAM174AQ8TBP5 190 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 FANK1Q8TC84 345 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 TIMP4Q99727 224 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 NDC1Q9BTX1 674 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 SGPP1Q9BX95 441 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 BEX1Q9HBH7 125 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 ACSS1Q9NUB1 689 aaPredicted RBP20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 SUSD2Q9UGT4 822 aa20.2■□□□□ 0.82
POLR2J3-220ENST00000613744 GPR89AB7ZAQ6 455 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 B4GALT2O60909 372 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 EPPINO95925 133 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 GPR89BP0CG08 455 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 TAS2R41P59536 307 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 ST3GAL3Q11203 375 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 SYPL1Q16563 259 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 CCSMST1Q4G0I0 132 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 UBE2NLQ5JXB2 153 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 SFRP5Q5T4F7 317 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 TCEAL6Q6IPX3 200 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 ADCK2Q7Z695 626 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 TMEM17Q86X19 198 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 SUN3Q8TAQ9 357 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 TCEAL3Q969E4 200 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 LRRC46Q96FV0 321 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 SLC35G5Q96KT7 338 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 OR2M4Q96R27 311 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 ACTR10Q9NZ32 417 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 MRPS7Q9Y2R9 242 aaKnown RBP20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 ADAMTS9Q9P2N4 1935 aa20.19■□□□□ 0.82
POLR2J3-220ENST00000613744 GABARAPH6UMI1 98 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 TNFRSF10CO14798 259 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 SULT1B1O43704 296 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 PLATP00750 562 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 TNFP01375 233 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 MPLP40238 635 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 DLX5P56178 289 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 TBPL1P62380 186 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 ZNF658BQ4V348 819 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 CLEC12AQ5QGZ9 265 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 ARL9Q6T311 187 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 NXPE4Q6UWF7 544 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 OR2T33Q8NG76 320 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 OR2I1PQ8NGU4 316 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 SETD7Q8WTS6 366 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 SCARF2Q96GP6 870 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 NKX6-2Q9C056 277 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 TP53BP1Q12888 1972 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 C17orf113A0A1B0GUU1 675 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 PRAMEF27A3QJZ7 478 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 EPXP11678 715 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 KHKP50053 298 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 MRPS10P82664 201 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 DECR1Q16698 335 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 PRRT3Q5FWE3 981 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 RNASE12Q5GAN4 147 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 PEAR1Q5VY43 1037 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 SFRP4Q6FHJ7 346 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 OR51G2Q8NGK0 314 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 OR6K3Q8NGY3 331 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 THEM6Q8WUY1 208 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 PRRX2Q99811 253 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 OR10A4Q9H209 315 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 SLC6A20Q9NP91 592 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 HINT3Q9NQE9 182 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 CA10Q9NS85 328 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 COA4Q9NYJ1 87 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 APOBEC3BQ9UH17 382 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 FLVCR2Q9UPI3 526 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 TMEM131Q92545 1883 aa20.18■□□□□ 0.82
POLR2J3-220ENST00000613744 LRP4O75096 1905 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 DAPL1A0PJW8 107 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 GSAPA4D1B5 854 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 H0YC42 278 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ARPC1BO15143 372 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ATP1B1P05026 303 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 NRG3P56975 720 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 E2F1Q01094 437 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 OR5M10Q6IEU7 315 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ZNF620Q6ZNG0 422 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 MEPCEQ7L2J0 689 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 SUMF1Q8NBK3 374 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 BBS1Q8NFJ9 593 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 ZNF480Q8WV37 535 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 SLC5A11Q8WWX8 675 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 FAM46AQ96IP4 442 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 NOX3Q9HBY0 568 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 FANCFQ9NPI8 374 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 KLHL1Q9NR64 748 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 PLCL2Q9UPR0 1127 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 A0A0G2JPF8 293 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 HNRNPCL3B7ZW38 293 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 SOCS6O14544 535 aa20.17■□□□□ 0.82
POLR2J3-220ENST00000613744 KLF4O43474 513 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms