RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 OR9K2Q8NGE7 335 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 OR52E4Q8NGH9 312 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 BOD1Q96IK1 185 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 ATP6V1G3Q96LB4 118 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 TRAF4Q9BUZ4 470 aaPredicted RBP13.9□□□□□ -0.18
VRK3-221ENST00000600284 ALG2Q9H553 416 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 SLC7A10Q9NS82 523 aa13.9□□□□□ -0.18
VRK3-221ENST00000600284 C5orf58C9J3I9 102 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 NPIPB7O75200 414 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 AKR7A3O95154 331 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 PPIBP23284 216 aaKnown RBP13.89□□□□□ -0.19
VRK3-221ENST00000600284 CDH11P55287 796 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 TSPO2Q5TGU0 170 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 C1orf140Q5VVS0 124 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 TMEM225Q6GV28 225 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
VRK3-221ENST00000600284 FUNDC1Q8IVP5 155 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 DEPDC4Q8N2C3 294 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 ZIC4Q8N9L1 334 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 OR52N5Q8NH56 324 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 C3orf49Q96BT1 292 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 SLCO1B3Q9NPD5 702 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 AMDHD2Q9Y303 409 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 NAV3Q8IVL0 2385 aa13.89□□□□□ -0.19
VRK3-221ENST00000600284 CADP27708 2225 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 OR6C65A6NJZ3 312 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 TMEM229AB2RXF0 380 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 FRS3O43559 492 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 CD8AP01732 235 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 NUDT7P0C024 238 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 PRG2P13727 222 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 PAX7P23759 505 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 CD40P25942 277 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 MPGP29372 298 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 PRKAR1BP31321 381 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 ATP4BP51164 291 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 P2RY4P51582 365 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 FOXG1P55316 489 aaPredicted RBP13.88□□□□□ -0.19
VRK3-221ENST00000600284 BNIP2Q12982 314 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 TNK1Q13470 666 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 CLEC12BQ2HXU8 276 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 AGAP6Q5VW22 663 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 AAED1Q7RTV5 226 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 SERPINA11Q86U17 422 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
VRK3-221ENST00000600284 WDR31Q8NA23 367 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 MFSD8Q8NHS3 518 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 STON2Q8WXE9 905 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 MAL2Q969L2 176 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 SPDL1Q96EA4 605 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 EBF4Q9BQW3 602 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 SPATA5L1Q9BVQ7 753 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 SLCO5A1Q9H2Y9 848 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 C12orf10Q9HB07 376 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 BARX1Q9HBU1 254 aaPredicted RBP13.88□□□□□ -0.19
VRK3-221ENST00000600284 SLC52A3Q9NQ40 469 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 SLC17A5Q9NRA2 495 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 SLC25A37Q9NYZ2 338 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 RASD1Q9Y272 281 aa13.88□□□□□ -0.19
VRK3-221ENST00000600284 ARAFP10398 606 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 CDKN1AP38936 164 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 ZNF83P51522 516 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 AQP5P55064 265 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 NRF1Q16656 503 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 REEP3Q6NUK4 255 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 SLC22A25Q6T423 547 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 C5orf46Q6UWT4 87 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 C6orf89Q6UWU4 347 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 GPAT4Q86UL3 456 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 MSRB3Q8IXL7 192 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 LSMEM1Q8N8F7 131 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 ZNF385AQ96PM9 386 aaKnown RBP13.87□□□□□ -0.19
VRK3-221ENST00000600284 DHRS9Q9BPW9 319 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 RABEP2Q9H5N1 569 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 OBP2BQ9NPH6 170 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 ADPRHL2Q9NX46 363 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 SLAMF8Q9P0V8 285 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 CORO2BQ9UQ03 480 aa13.87□□□□□ -0.19
VRK3-221ENST00000600284 M0R1B8 84 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 OR2T1O43869 369 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 AHSA1O95433 338 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 WNT11O96014 354 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 GPX2P18283 190 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 TTKP33981 857 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 PRPS1P60891 318 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 TTMPQ5BVD1 217 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 PAGE3Q5JUK9 113 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 GCNT6Q5T4J0 391 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 ZNF544Q6NX49 715 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 DHRS4L2Q6PKH6 230 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 CREB3L2Q70SY1 520 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 KRT73Q86Y46 540 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 TMEM38AQ9H6F2 299 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 EVA1AQ9H8M9 152 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 FKRPQ9H9S5 495 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 CBLN4Q9NTU7 201 aa13.86□□□□□ -0.19
VRK3-221ENST00000600284 RPS6KB2Q9UBS0 482 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms