RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ZG16BQ96DA0 208 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 FBXO17Q96EF6 278 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 DNAJA3Q96EY1 480 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 KATNB1Q9BVA0 655 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 CENPHQ9H3R5 247 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 BTNL2Q9UIR0 455 aa14.87□□□□□ -0.03
PNKP-210ENST00000597965 LOC100289279A0A1B0GTE1 492 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 B9A039 149 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 E9PBE3 544 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 ATP6V1G2-DDX39BF2Z307 99 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 HMGN4O00479 90 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 BCAS1O75363 584 aaPredicted RBP14.86□□□□□ -0.03
PNKP-210ENST00000597965 S100A3P33764 101 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 SERPINF1P36955 418 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 COPZ1P61923 177 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 FUT5Q11128 374 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 ZSWIM7Q19AV6 140 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 C3orf36Q3SXR2 165 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 LIPNQ5VXI9 398 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 TMEM225Q6GV28 225 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 SLC46A3Q7Z3Q1 461 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 GPAT4Q86UL3 456 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 PEX5LQ8IYB4 626 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 CNOT9Q92600 299 aaKnown RBP14.86□□□□□ -0.03
PNKP-210ENST00000597965 TAPBPLQ9BX59 468 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 MOKQ9UQ07 419 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 RAP2CQ9Y3L5 183 aa14.86□□□□□ -0.03
PNKP-210ENST00000597965 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■■■□□ 14.6
PNKP-210ENST00000597965 A0A096LPI6 279 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 TMEM72A0PK05 275 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 VWC2LB2RUY7 222 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 ZNF587BE7ETH6 402 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 HAX1O00165 279 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 RGS16O15492 202 aaPredicted RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 SERPINE1P05121 402 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 IMPDH2P12268 514 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 HOXB1P14653 301 aaPredicted RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 LBPP18428 481 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 RPL14P50914 215 aaKnown RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 FOXG1P55316 489 aaPredicted RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 ABCE1P61221 599 aaKnown RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 MAGOHP61326 146 aaKnown RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 FAM174BQ3ZCQ3 159 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 IQCCQ4KMZ1 466 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 FAM120AOSQ5T036 256 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 RNF130Q86XS8 419 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 OR9K2Q8NGE7 335 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 PPP1R36Q96LQ0 422 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 CCDC115Q96NT0 180 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 SLC38A2Q96QD8 506 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 PANX1Q96RD7 426 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 VRK1Q99986 396 aaPredicted RBP14.85□□□□□ -0.03
PNKP-210ENST00000597965 ADAM19Q9H013 955 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 RAB1BQ9H0U4 201 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 ARMC7Q9H6L4 198 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 CA10Q9NS85 328 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 CALML5Q9NZT1 146 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 ARFGEF3Q5TH69 2177 aa14.85□□□□□ -0.03
PNKP-210ENST00000597965 CCDC154A6NI56 674 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 LIPT2A6NK58 231 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 AQP7P3A6NL99 342 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 CLDN24A6NM45 220 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 AP3D1O14617 1153 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 BIRC5O15392 142 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 C8BP07358 591 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 NR2F1P10589 423 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 CDH2P19022 906 aaPredicted RBP14.84□□□□□ -0.03
PNKP-210ENST00000597965 ETV4P43268 484 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 SH3BGRP55822 239 aaPredicted RBP14.84□□□□□ -0.03
PNKP-210ENST00000597965 EPS8Q12929 822 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 CEACAM7Q14002 265 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 OR7A5Q15622 319 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 KRTAP24-1Q3LI83 254 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 SPANXN4Q5MJ08 99 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 UGT2A3Q6UWM9 527 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 FAM169BQ8N8A8 192 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 ZNF781Q8N8C0 355 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 OR4F15Q8NGB8 312 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 C19orf24Q9BVV8 132 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 SLC38A1Q9H2H9 487 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 CHODLQ9H9P2 273 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 CACYBPQ9HB71 228 aaKnown RBP14.84□□□□□ -0.03
PNKP-210ENST00000597965 MALRD1Q5VYJ5 2156 aa14.84□□□□□ -0.03
PNKP-210ENST00000597965 A8MVM7 634 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 TYROBPO43914 113 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 AKR7A3O95154 331 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 KRT75O95678 551 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 RPS4Y1P22090 263 aaKnown RBP14.83□□□□□ -0.04
PNKP-210ENST00000597965 IGFBP5P24593 272 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 PPOXP50336 477 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 SLC25A3Q00325 362 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 EFNB3Q15768 340 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 CHI3L2Q15782 390 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 SYPL1Q16563 259 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 CARTPTQ16568 116 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 MST1LQ2TV78 715 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 HIKESHIQ53FT3 197 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 MRPL2Q5T653 305 aaKnown RBP14.83□□□□□ -0.04
PNKP-210ENST00000597965 WBP2NLQ6ICG8 309 aa14.83□□□□□ -0.04
PNKP-210ENST00000597965 TMEM99Q8N816 258 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms