RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 OGFOD2Q6N063 350 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 ZNF544Q6NX49 715 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 PAQR6Q6TCH4 344 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 ZNF621Q6ZSS3 439 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 IL17RELQ6ZVW7 336 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 TUBA1AQ71U36 451 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 LINGO2Q7L985 606 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 GPAT4Q86UL3 456 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 CMIPQ8IY22 773 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 CADM2Q8N3J6 435 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 ARIH2OSQ8N7S6 290 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 ANKRD42Q8N9B4 389 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 C1orf162Q8NEQ5 155 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 OR9K2Q8NGE7 335 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 FBXO17Q96EF6 278 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 SORCS2Q96PQ0 1159 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 OR52E6Q96RD3 313 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 NAA11Q9BSU3 229 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 WDR55Q9H6Y2 383 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 SEC61A2Q9H9S3 476 aa10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-228ENST00000597828 IGHV1-18A0A0C4DH31 117 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 CFAP73A6NFT4 308 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 LIPT2A6NK58 231 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 FAAHO00519 579 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 FRS3O43559 492 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 EIF1BO60739 113 aaKnown RBP10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 BCHEP06276 602 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 FAM157CP0CG43 387 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 NR2F1P10589 423 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 ETFAP13804 333 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 SLC25A16P16260 332 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 EPHA3P29320 983 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 MPGP29372 298 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 ACAA2P42765 397 aaKnown RBP10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 SELENOPP49908 381 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 P2RY4P51582 365 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 MVDP53602 400 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 WDR4P57081 412 aaKnown RBP10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 STX3Q13277 289 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 MST1LQ2TV78 715 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 AAED1Q7RTV5 226 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 DEPDC4Q8N2C3 294 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 C17orf78Q8N4C9 275 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 DYDC1Q8WWB3 177 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 TMEM45BQ96B21 275 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 AURKBQ96GD4 344 aaPredicted RBP10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 KCNK17Q96T54 332 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 ADPRHL2Q9NX46 363 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 CHST2Q9Y4C5 530 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 GPR45Q9Y5Y3 372 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 STAB1Q9NY15 2570 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 DSPPQ9NZW4 1301 aa10.56□□□□□ -0.72
SOX2-OT-228ENST00000597828 DYSFO75923 2080 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 CDHR4A6H8M9 788 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 AQP7P3A6NL99 342 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 NR5A2O00482 541 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 LGI1O95970 557 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 IFNA2P01563 188 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 GPIP06744 558 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 DBIP07108 87 aaKnown RBP10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 KITP10721 976 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 IGFBP5P24593 272 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 CXCR1P25024 350 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 FKBP2P26885 142 aaKnown RBP10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 APOBEC3AP31941 199 aaPredicted RBP10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 EFNA4P52798 201 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 DSCR9P59020 149 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 PRPS1P60891 318 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 GGTLC2Q14390 218 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 TBRG1Q3YBR2 411 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 KLHL24Q6TFL4 600 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 MYPOPQ86VE0 399 aaPredicted RBP10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 CLIP4Q8N3C7 705 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 TRIML2Q8N7C3 387 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 ANKS4BQ8N8V4 417 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 OR52P1PQ8NH57 321 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 MGARPQ8TDB4 240 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 PMM1Q92871 262 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 C3orf49Q96BT1 292 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 NELFAQ9H3P2 528 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 CHODLQ9H9P2 273 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 FKRPQ9H9S5 495 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 PARPBPQ9NWS1 579 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 SEC14L4Q9UDX3 406 aa10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 ZNF443Q9Y2A4 671 aaPredicted RBP10.55□□□□□ -0.72
SOX2-OT-228ENST00000597828 SLC35F4A4IF30 521 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 VWC2LB2RUY7 222 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 RFXANKO14593 260 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 UPK3AO75631 287 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 CELA3BP08861 270 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 KRTAP24-1Q3LI83 254 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 TTMPQ5BVD1 217 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 NIPAL3Q6P499 406 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 VHLLQ6RSH7 139 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 SERPINA11Q86U17 422 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 PEX5LQ8IYB4 626 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 LRRC34Q8IZ02 419 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms