RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 DLEU7Q6UYE1 221 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 HDXQ7Z353 690 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 BIVMQ86UB2 503 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 ZIC4Q8N9L1 334 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 OR9K2Q8NGE7 335 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 OR52N5Q8NH56 324 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 SLC35B4Q969S0 331 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 NGBQ9NPG2 151 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 ASB6Q9NWX5 421 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 ADPRHL2Q9NX46 363 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 LAMP3Q9UQV4 416 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 MAGED1Q9Y5V3 778 aaPredicted RBP11.48□□□□□ -0.57
LIG1-212ENST00000596549 SLC25A15Q9Y619 301 aa11.48□□□□□ -0.57
LIG1-212ENST00000596549 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
LIG1-212ENST00000596549 CADP27708 2225 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 A0A1W2PP18 115 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 A8MVM7 634 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 H7C1Q1 480 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 OVOL3O00110 214 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 ABCD4O14678 606 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 TPST1O60507 370 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 GPX2P18283 190 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 PRKAR1BP31321 381 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 COPZ1P61923 177 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 RPS4XP62701 263 aaKnown RBP11.47□□□□□ -0.57
LIG1-212ENST00000596549 CDK6Q00534 326 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 SELPLGQ14242 412 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 ADRM1Q16186 407 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 C1orf140Q5VVS0 124 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 DHRS4L2Q6PKH6 230 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 C6orf89Q6UWU4 347 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 Q71RC1 249 aaPredicted RBP11.47□□□□□ -0.57
LIG1-212ENST00000596549 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 WFDC6Q9BQY6 131 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 NAA11Q9BSU3 229 aaPredicted RBP11.47□□□□□ -0.57
LIG1-212ENST00000596549 CXorf56Q9H5V9 222 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 TMEM38AQ9H6F2 299 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 NPHS2Q9NP85 383 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 TMEM45AQ9NWC5 275 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 SEC14L4Q9UDX3 406 aa11.47□□□□□ -0.57
LIG1-212ENST00000596549 IGKV1D-42A0A075B6H8 117 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 CIB4A0PJX0 185 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 C5orf58C9J3I9 102 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 TMCC2O75069 709 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 PNMTP11086 282 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 PPIBP23284 216 aaKnown RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 AQP1P29972 269 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 CDKN1AP38936 164 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 IRX1P78414 480 aaPredicted RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 LGALS3BPQ08380 585 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 SCARB2Q14108 478 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 REEP3Q6NUK4 255 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 B3GLCTQ6Y288 498 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 DHDDSQ86SQ9 333 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 GPAT4Q86UL3 456 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 P2RY8Q86VZ1 359 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 PTOV1Q86YD1 416 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 WDR31Q8NA23 367 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 STK35Q8TDR2 534 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 KTI12Q96EK9 354 aaPredicted RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 MUS81Q96NY9 551 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 ALKBH3Q96Q83 286 aaPredicted RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 SF3B5Q9BWJ5 86 aaKnown RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 SLCO5A1Q9H2Y9 848 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 CACYBPQ9HB71 228 aaKnown RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 ARGLU1Q9NWB6 273 aaPredicted RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.46□□□□□ -0.57
LIG1-212ENST00000596549 DCTN4Q9UJW0 460 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 PRDM4Q9UKN5 801 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 ZNF232Q9UNY5 417 aa11.46□□□□□ -0.57
LIG1-212ENST00000596549 NSD1Q96L73 2696 aaPredicted RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 A0A1B0GWA3 101 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 CCT8L1PA6NM43 557 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 AHSA1O95433 338 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 RPS5P46782 204 aaKnown RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 SELENOPP49908 381 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 ZNF83P51522 516 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 CDH11P55287 796 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 ATP5J2P56134 94 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 MTPNP58546 118 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 RUNDC3AQ59EK9 446 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 DTX2Q86UW9 622 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 EPHX4Q8IUS5 362 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 C17orf78Q8N4C9 275 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 LSMEM1Q8N8F7 131 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 SMAP2Q8WU79 429 aaPredicted RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 MUCL1Q96DR8 90 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 TRAF4Q9BUZ4 470 aaPredicted RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 TAPBPLQ9BX59 468 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 ARMC7Q9H6L4 198 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 C12orf10Q9HB07 376 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 SLC17A5Q9NRA2 495 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 B3GAT1Q9P2W7 334 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 TESQ9UGI8 421 aaKnown RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 LEF1Q9UJU2 399 aaPredicted RBP11.45□□□□□ -0.58
LIG1-212ENST00000596549 USF3Q68DE3 2245 aa11.45□□□□□ -0.58
LIG1-212ENST00000596549 TPST2O60704 377 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms