RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 FGD3Q5JSP0 725 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 NCCRP1Q6ZVX7 275 aaPredicted RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 RNF113BQ8IZP6 322 aaKnown RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MBD3L2Q8NHZ7 208 aaPredicted RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 WNT2BQ93097 391 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 SLC25A36Q96CQ1 311 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MED31Q9Y3C7 131 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MED12LQ86YW9 2145 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 IGHV3-15A0A0B4J1V0 119 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 ZNF814B7Z6K7 855 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 CCL21O00585 134 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 SMAD9O15198 467 aaKnown RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 LRRTM2O43300 516 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 PIP5K1CO60331 668 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 ENTPD5O75356 428 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 TIPRLO75663 272 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 SLC35A1P78382 337 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 PPP1R8Q12972 351 aaKnown RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 ZNF730Q6ZMV8 503 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MBOAT2Q6ZWT7 520 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 NRMQ8IXM6 262 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 C9orf106Q8NAJ2 232 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 OR4C15Q8NGM1 316 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 PYDC1Q8WXC3 89 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 TAPBPLQ9BX59 468 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 KLHL4Q9C0H6 718 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 YY1AP1Q9H869 796 aa20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 MCTS1Q9ULC4 181 aaKnown RBP20.16■□□□□ 0.82
SNRNP70-204ENST00000595231 DOCK7Q96N67 2140 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 SYNGR4O95473 234 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 ZNF74Q16587 644 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 FJX1Q86VR8 437 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 ALPK1Q96QP1 1244 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 RNF122Q9H9V4 155 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 SEC14L4Q9UDX3 406 aa20.15■□□□□ 0.82
SNRNP70-204ENST00000595231 UBR5O95071 2799 aaPredicted RBP20.14■□□□□ 0.82
SNRNP70-204ENST00000595231 A0A1B0GUH1 482 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 SH3PXD2BA1X283 911 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 ENO4A6NNW6 628 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 TNFRSF11BO00300 401 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 EIF1BO60739 113 aaKnown RBP20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 AKR7A3O95154 331 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 CH25HO95992 272 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 CBLP22681 906 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 TIMP3P35625 211 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 P2RY4P51582 365 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 CTBP2P56545 445 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 NUP107P57740 925 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 PRKCDQ05655 676 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 PMPCAQ10713 525 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 EXOC3L2Q2M3D2 409 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 C4orf17Q53FE4 359 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 PAQR6Q6TCH4 344 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 SLC46A3Q7Z3Q1 461 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 CCDC103Q8IW40 242 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 RNF128Q8TEB7 428 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 U3KQV3 271 aa20.14■□□□□ 0.81
SNRNP70-204ENST00000595231 H3BNX3 289 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 RAMP1O60894 148 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 GRPRP30550 384 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 PPP4R4Q6NUP7 873 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 FCRLAQ7L513 359 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 LRRC17Q8N6Y2 441 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 TMEM99Q8N816 258 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 OR4K5Q8NGD3 323 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 BPIFA2Q96DR5 249 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 REEP1Q9H902 201 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 DNAJB9Q9UBS3 223 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 CLOCKO15516 846 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 HNRNPRO43390 633 aaKnown RBP20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 CYTIPO60759 359 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 MT-ATP6P00846 226 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 CEACAM8P31997 349 aaPredicted RBP20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 MEX3DQ86XN8 651 aaKnown RBP20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 C10orf53Q8N6V4 93 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 ABHD3Q8WU67 409 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 LIPHQ8WWY8 451 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 ZHX1-C8orf76Q96EF9 292 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 TM9SF2Q99805 663 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 PRRG4Q9BZD6 226 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 NTN4Q9HB63 628 aa20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 ING1Q9UK53 422 aaPredicted RBP20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 SAMHD1Q9Y3Z3 626 aaKnown RBP20.13■□□□□ 0.81
SNRNP70-204ENST00000595231 HTR3EA5X5Y0 456 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 AQP7P3A6NL99 342 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 M0R082 166 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 RRP9O43818 475 aaKnown RBP20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 RCBTB2O95199 551 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 ASAH2BP0C7U1 165 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 FCGR2AP12318 317 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 IFI30P13284 250 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 MAKP20794 623 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 IST1P53990 364 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 MFSD13AQ14CX5 517 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 OTUD3Q5T2D3 398 aaPredicted RBP20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 TMEM211Q6ICI0 200 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 RRM2BQ7LG56 351 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 P4HA3Q7Z4N8 544 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 TMEM179BQ7Z7N9 219 aa20.12■□□□□ 0.81
SNRNP70-204ENST00000595231 NAXEQ8NCW5 288 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms