RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 AQP7P3A6NL99 342 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 ATP6V1G2-DDX39BF2Z307 99 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 AKR7A3O95154 331 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 WNT11O96014 354 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 CXCR1P25024 350 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 BST1Q10588 318 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 OR7A5Q15622 319 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 MAPK11Q15759 364 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 PHC2Q8IXK0 858 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 ZBTB18Q99592 522 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 RLIMQ9NVW2 624 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 GPR45Q9Y5Y3 372 aa20.91■□□□□ 0.94
LSM4-202ENST00000593564 DSPPQ9NZW4 1301 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 KRT75O95678 551 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 LIN52Q52LA3 116 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 TNFAIP8L3Q5GJ75 292 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 ABHD12BQ7Z5M8 362 aaPredicted RBP20.9■□□□□ 0.94
LSM4-202ENST00000593564 NANOS1Q8WY41 292 aaKnown RBP20.9■□□□□ 0.94
LSM4-202ENST00000593564 TMEM158Q8WZ71 300 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 OBP2BQ9NPH6 170 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 P2RX2Q9UBL9 471 aa20.9■□□□□ 0.94
LSM4-202ENST00000593564 F12P00748 615 aaPredicted RBP20.89■□□□□ 0.93
LSM4-202ENST00000593564 GKN3PP0CG01 181 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 ACAA2P42765 397 aaKnown RBP20.89■□□□□ 0.93
LSM4-202ENST00000593564 SWI5Q1ZZU3 235 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 CYB5R2Q6BCY4 276 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 WBP2NLQ6ICG8 309 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 ZNF836Q6ZNA1 936 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 GPAT4Q86UL3 456 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 GLB1L3Q8NCI6 653 aaPredicted RBP20.89■□□□□ 0.93
LSM4-202ENST00000593564 OR52P1PQ8NH57 321 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 KCNK17Q96T54 332 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 KCNK9Q9NPC2 374 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 CALML5Q9NZT1 146 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 MOKQ9UQ07 419 aa20.89■□□□□ 0.93
LSM4-202ENST00000593564 A8MVM7 634 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 RFXANKO14593 260 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 CDH2P19022 906 aaPredicted RBP20.88■□□□□ 0.93
LSM4-202ENST00000593564 USF1P22415 310 aaPredicted RBP20.88■□□□□ 0.93
LSM4-202ENST00000593564 P2RY4P51582 365 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 MVDP53602 400 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 COPZ1P61923 177 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 MST1LQ2TV78 715 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 HIKESHIQ53FT3 197 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 VRK2Q86Y07 508 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 CADM2Q8N3J6 435 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 AURKBQ96GD4 344 aaPredicted RBP20.88■□□□□ 0.93
LSM4-202ENST00000593564 TAPBPLQ9BX59 468 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 WDR55Q9H6Y2 383 aaPredicted RBP20.88■□□□□ 0.93
LSM4-202ENST00000593564 LPAR3Q9UBY5 353 aa20.88■□□□□ 0.93
LSM4-202ENST00000593564 YLPM1P49750 1951 aaKnown RBP20.87■□□□□ 0.93
LSM4-202ENST00000593564 HDAC3O15379 428 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 LY6HO94772 140 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 VAMP5O95183 116 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 IL6P05231 212 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 IGHV4-31P0DP07 118 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 PAX7P23759 505 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 EPHA3P29320 983 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 CRISP3P54108 245 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 BNIP2Q12982 314 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 RNF220Q5VTB9 566 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 TMEM225Q6GV28 225 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 FBXO17Q96EF6 278 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 BEX2Q9BXY8 128 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 CENPHQ9H3R5 247 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 SLC6A13Q9NSD5 602 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 TMEM45AQ9NWC5 275 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 ADPRHL2Q9NX46 363 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 ZNF443Q9Y2A4 671 aaPredicted RBP20.87■□□□□ 0.93
LSM4-202ENST00000593564 FKBP7Q9Y680 259 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 ARFGEF3Q5TH69 2177 aa20.87■□□□□ 0.93
LSM4-202ENST00000593564 IGHV1-18A0A0C4DH31 117 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 TRPC5OSA6NMA1 111 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 ZNF587BE7ETH6 402 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 KLF11O14901 512 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 PHF1O43189 567 aaPredicted RBP20.86■□□□□ 0.93
LSM4-202ENST00000593564 FRS3O43559 492 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 KRT33AO76009 404 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 ZNF16P17020 682 aaPredicted RBP20.86■□□□□ 0.93
LSM4-202ENST00000593564 ZSWIM7Q19AV6 140 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 TBRG1Q3YBR2 411 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 CREB3L2Q70SY1 520 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 OR1K1Q8NGR3 316 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 SLC38A2Q96QD8 506 aa20.86■□□□□ 0.93
LSM4-202ENST00000593564 PAIP2Q9BPZ3 127 aaKnown RBP20.86■□□□□ 0.93
LSM4-202ENST00000593564 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.86■□□□□ 0.93
LSM4-202ENST00000593564 V9GYY5 206 aaPredicted RBP20.86■□□□□ 0.93
LSM4-202ENST00000593564 A0A096LPI6 279 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 OR6C65A6NJZ3 312 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 NPIPB7O75200 414 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 TFPTP0C1Z6 253 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 ZCCHC18P0CG32 403 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 ETFAP13804 333 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 SELENOPP49908 381 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 PDLIM4P50479 330 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 DSTNP60981 165 aa20.85■□□□□ 0.93
LSM4-202ENST00000593564 SNRPD2P62316 118 aaKnown RBP20.85■□□□□ 0.93
LSM4-202ENST00000593564 LSM11P83369 360 aaKnown RBP eCLIP20.85■□□□□ 0.93
LSM4-202ENST00000593564 LARS2Q15031 903 aaKnown RBP20.85■□□□□ 0.93
LSM4-202ENST00000593564 PDCD4Q53EL6 469 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms