RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CLOCKO15516 846 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 PHF1O43189 567 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-213ENST00000593254 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-213ENST00000593254 DANCRP0C864 163 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 PRG2P13727 222 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 CXCR1P25024 350 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 IDUAP35475 653 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 AQP5P55064 265 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 ATP5J2P56134 94 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 COPZ1P61923 177 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 MSRB3Q8IXL7 192 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 UBE2J2Q8N2K1 259 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 CADM2Q8N3J6 435 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 GOLGA6L1Q8N7Z2 621 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 MAL2Q969L2 176 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 FBXW5Q969U6 566 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 MUCL1Q96DR8 90 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 SPDL1Q96EA4 605 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 NAA11Q9BSU3 229 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-213ENST00000593254 ARMC7Q9H6L4 198 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 TMEM45AQ9NWC5 275 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 ASB6Q9NWX5 421 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 TAS2R16Q9NYV7 291 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 CCDC167Q9P0B6 97 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 SLAMF8Q9P0V8 285 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 ZNF232Q9UNY5 417 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 SLC9A8Q9Y2E8 581 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 IFT52Q9Y366 437 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 GMEB1Q9Y692 573 aa11.62□□□□□ -0.55
H3F3B-213ENST00000593254 TRBV5-3A0A0A0MS03 114 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 PDLIM1O00151 329 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 NR5A2O00482 541 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 CD5LO43866 347 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 RAD51DO75771 328 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 GPIP06744 558 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 ITGA5P08648 1049 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 ATP4BP51164 291 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 IRX1P78414 480 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-213ENST00000593254 BNIP2Q12982 314 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 CEACAM7Q14002 265 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 ZNF672Q499Z4 452 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-213ENST00000593254 OTUD3Q5T2D3 398 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-213ENST00000593254 CASP12Q6UXS9 341 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 SERPINA11Q86U17 422 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 KBTBD8Q8NFY9 601 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 BBS10Q8TAM1 723 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 DYDC1Q8WWB3 177 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 NEUROG1Q92886 237 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 C3orf49Q96BT1 292 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 TRIM2Q9C040 744 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 CACYBPQ9HB71 228 aaKnown RBP11.61□□□□□ -0.55
H3F3B-213ENST00000593254 PARPBPQ9NWS1 579 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 NPAP1Q9NZP6 1156 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 LAMP3Q9UQV4 416 aa11.61□□□□□ -0.55
H3F3B-213ENST00000593254 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 AQP7P3A6NL99 342 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 CCT8L1PA6NM43 557 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 A8MVM7 634 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 HMGB1P1B2RPK0 211 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 TMEM229AB2RXF0 380 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 OVOL3O00110 214 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 FRS3O43559 492 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 NPIPB7O75200 414 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 AKR7A3O95154 331 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 SOD3P08294 240 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 ARAFP10398 606 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 ETS2P15036 469 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 NCF2P19878 526 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 FOXG1P55316 489 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 RPS4XP62701 263 aaKnown RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 FAPQ12884 760 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 OR7A5Q15622 319 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 ZNF311Q5JNZ3 666 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 PAGE3Q5JUK9 113 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 TMEM99Q8N816 258 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 OR52E4Q8NGH9 312 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 SMAP2Q8WU79 429 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 STON2Q8WXE9 905 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 TMEM45BQ96B21 275 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 MUS81Q96NY9 551 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 RSPO3Q9BXY4 272 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 AMBRA1Q9C0C7 1298 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 PIF1Q9H611 641 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 VIPAS39Q9H9C1 493 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 SLC7A10Q9NS82 523 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 INTS9Q9NV88 658 aaKnown RBP11.6□□□□□ -0.55
H3F3B-213ENST00000593254 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 DCTN4Q9UJW0 460 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 SLC25A15Q9Y619 301 aa11.6□□□□□ -0.55
H3F3B-213ENST00000593254 YLPM1P49750 1951 aaKnown RBP11.59□□□□□ -0.55
H3F3B-213ENST00000593254 SHISA9B4DS77 424 aa11.59□□□□□ -0.55
H3F3B-213ENST00000593254 C5orf58C9J3I9 102 aa11.59□□□□□ -0.55
H3F3B-213ENST00000593254 TP53P04637 393 aaPredicted RBP11.59□□□□□ -0.55
H3F3B-213ENST00000593254 PPIBP23284 216 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms