RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 H7C417 338 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 HDAC3O15379 428 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 ANP32DO95626 131 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 BCHEP06276 602 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 ETFAP13804 333 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 CRATP43155 626 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 MVDP53602 400 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 COPZ1P61923 177 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 TMEM249Q2WGJ8 235 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 HIKESHIQ53FT3 197 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 C6orf52Q5T4I8 152 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 PODNL1Q6PEZ8 512 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 KLHL24Q6TFL4 600 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 MGARPQ8TDB4 240 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 AURKBQ96GD4 344 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-207ENST00000593089 TNFRSF13CQ96RJ3 184 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 REPIN1Q9BWE0 567 aaKnown RBP17.91■□□□□ 0.46
TRIM47-207ENST00000593089 SF3B5Q9BWJ5 86 aaKnown RBP17.91■□□□□ 0.46
TRIM47-207ENST00000593089 TAPBPLQ9BX59 468 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 MANSC1Q9H8J5 431 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 MOKQ9UQ07 419 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 ZNF443Q9Y2A4 671 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-207ENST00000593089 DSPPQ9NZW4 1301 aa17.91■□□□□ 0.46
TRIM47-207ENST00000593089 ELOA3DA6NLF2 546 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 KLF11O14901 512 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 KRT33AO76009 404 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 WNT11O96014 354 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 IFNA2P01563 188 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 IL6P05231 212 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 BMP4P12644 408 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 APOBEC3AP31941 199 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 ACAA2P42765 397 aaKnown RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 CRISP3P54108 245 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 WDR4P57081 412 aaKnown RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 DSTNP60981 165 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 CHRNB3Q05901 458 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 ELOA3BQ3SY89 546 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 CHRFAM7AQ494W8 412 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 PDCD4Q53EL6 469 aaKnown RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 RPS26P11Q5JNZ5 115 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 TMEM225Q6GV28 225 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 WBP2NLQ6ICG8 309 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 POMGNT2Q8NAT1 580 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 ELOA3Q8NG57 546 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 FAM168AQ92567 244 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 THAP1Q9NVV9 213 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 CALML5Q9NZT1 146 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 COL6A5A8TX70 2615 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 ATRQ13535 2644 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 CUBNO60494 3623 aa17.9■□□□□ 0.46
TRIM47-207ENST00000593089 YLPM1P49750 1951 aaKnown RBP17.9■□□□□ 0.46
TRIM47-207ENST00000593089 SNNO75324 88 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-207ENST00000593089 SLC22A3O75751 556 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 LY6HO94772 140 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 PRG2P13727 222 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 IDO1P14902 403 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 SLC25A16P16260 332 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 NCF2P19878 526 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-207ENST00000593089 LGALS3BPQ08380 585 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 LOXL1Q08397 574 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-207ENST00000593089 GTDC1Q4AE62 458 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 CLIP4Q8N3C7 705 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 SLC38A5Q8WUX1 472 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 FBXO17Q96EF6 278 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 TPT1P8Q9HAU6 139 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 PMF1-BGLAPU3KQ54 211 aa17.89■□□□□ 0.45
TRIM47-207ENST00000593089 TMEM120BA0PK00 339 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 RNF212BA8MTL3 300 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 A8MVM7 634 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 FRS3O43559 492 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 TFPTP0C1Z6 253 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 EFNA4P52798 201 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 LARS2Q15031 903 aaKnown RBP17.88■□□□□ 0.45
TRIM47-207ENST00000593089 SLC9B1Q4ZJI4 515 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 RNF220Q5VTB9 566 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 C1orf140Q5VVS0 124 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 ABHD12BQ7Z5M8 362 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-207ENST00000593089 CROCCP2Q86T23 111 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 NANOS1Q8WY41 292 aaKnown RBP17.88■□□□□ 0.45
TRIM47-207ENST00000593089 TMEM19Q96HH6 336 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 TMEM45AQ9NWC5 275 aa17.88■□□□□ 0.45
TRIM47-207ENST00000593089 LGI1O95970 557 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 SELENOPP49908 381 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 P2RY4P51582 365 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 VLDLRP98155 873 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 TBRG1Q3YBR2 411 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 C1QTNF12Q5T7M4 302 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 PRAMEF8Q5VWM4 474 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 PRAMEF7Q5VXH5 474 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 NIPAL3Q6P499 406 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 CREB3L2Q70SY1 520 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 SERPINA11Q86U17 422 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 OR1K1Q8NGR3 316 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 C10orf105Q8TEF2 133 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 ITCHQ96J02 903 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 MAELQ96JY0 434 aaKnown RBP17.87■□□□□ 0.45
TRIM47-207ENST00000593089 ALKBH3Q96Q83 286 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-207ENST00000593089 PIF1Q9H611 641 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 RMND5AQ9H871 391 aa17.87■□□□□ 0.45
TRIM47-207ENST00000593089 CACYBPQ9HB71 228 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms