RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 MALT1Q9UDY8 824 aa24.06■■□□□ 1.44
SMAD4-213ENST00000591914 TEP1Q99973 2627 aaKnown RBP24.06■■□□□ 1.44
SMAD4-213ENST00000591914 AHSA1O95433 338 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 IGHV3-9P01782 118 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 PCGF2P35227 344 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 MMEL1Q495T6 779 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 REP15Q6BDI9 236 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 SNX32Q86XE0 403 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 SMYD1Q8NB12 490 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 OR8J3Q8NGG0 315 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 MFSD8Q8NHS3 518 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 SH3GL1Q99961 368 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 PTDSS2Q9BVG9 487 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 PRR14Q9BWN1 585 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 PARPBPQ9NWS1 579 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 SLC13A4Q9UKG4 626 aa24.05■■□□□ 1.44
SMAD4-213ENST00000591914 ITPR3Q14573 2671 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 PRRC2AP48634 2157 aaKnown RBP24.04■■□□□ 1.44
SMAD4-213ENST00000591914 FTCDNL1E5RQL4 147 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 M0QX08 132 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 MRASO14807 208 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 SLC22A2O15244 555 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 TPST2O60704 377 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 FZD7O75084 574 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 PNMTP11086 282 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 NCALDP61601 193 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 DUSP7Q16829 419 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 DEFB113Q30KQ7 82 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 RABL3Q5HYI8 236 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 ALG10BQ5I7T1 473 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 FAM91A1Q658Y4 838 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 ULK3Q6PHR2 472 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 SEZ6L2Q6UXD5 910 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 CASP12Q6UXS9 341 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 UBE2J2Q8N2K1 259 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 ZNF433Q8N7K0 673 aaPredicted RBP24.04■■□□□ 1.44
SMAD4-213ENST00000591914 OR9K2Q8NGE7 335 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 TMEM45BQ96B21 275 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 KTI12Q96EK9 354 aaPredicted RBP24.04■■□□□ 1.44
SMAD4-213ENST00000591914 PLPPR2Q96GM1 343 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 TMEM204Q9BSN7 226 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 PIF1Q9H611 641 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 CAPN7Q9Y6W3 813 aa24.04■■□□□ 1.44
SMAD4-213ENST00000591914 MAP1AP78559 2803 aaPredicted RBP24.04■■□□□ 1.44
SMAD4-213ENST00000591914 RAI1Q7Z5J4 1906 aaPredicted RBP24.04■■□□□ 1.44
SMAD4-213ENST00000591914 LGI1O95970 557 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 OPN1SWP03999 348 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 C8BP07358 591 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 VMACQ2NL98 169 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 C5orf46Q6UWT4 87 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 PATL1Q86TB9 770 aaKnown RBP24.03■■□□□ 1.44
SMAD4-213ENST00000591914 CALHM3Q86XJ0 350 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 ZIC4Q8N9L1 334 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 GPR32P1Q8NGA4 272 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 SLC38A4Q969I6 547 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 ASB6Q9NWX5 421 aa24.03■■□□□ 1.44
SMAD4-213ENST00000591914 IGKV1D-42A0A075B6H8 117 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 LOC100653049A0A140TA62 436 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 KRT34O76011 436 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 VAMP5O95183 116 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 RPS5P46782 204 aaKnown RBP24.02■■□□□ 1.44
SMAD4-213ENST00000591914 OR1Q1Q15612 314 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 ACKR1Q16570 336 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 NRF1Q16656 503 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 INTS11Q5TA45 600 aaKnown RBP24.02■■□□□ 1.44
SMAD4-213ENST00000591914 TMEM225Q6GV28 225 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 RANBP3LQ86VV4 465 aaPredicted RBP24.02■■□□□ 1.44
SMAD4-213ENST00000591914 SLC47A1Q96FL8 570 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 ARHGDIGQ99819 225 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 UBTD1Q9HAC8 227 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 TMEM27Q9HBJ8 222 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 ARMCX1Q9P291 453 aa24.02■■□□□ 1.44
SMAD4-213ENST00000591914 A0A0B4J2E0 115 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 A0A1B0GX12 115 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 FMO6PO60774 539 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 GGT1P19440 569 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 TIMM23BQ5SRD1 257 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 ALKBH2Q6NS38 261 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 ZNF704Q6ZNC4 412 aaPredicted RBP24.01■■□□□ 1.43
SMAD4-213ENST00000591914 CCDC80Q76M96 950 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 GPAT4Q86UL3 456 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 P2RY8Q86VZ1 359 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 PCYOX1LQ8NBM8 494 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 TAMM41Q96BW9 452 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 ZNF385AQ96PM9 386 aaKnown RBP24.01■■□□□ 1.43
SMAD4-213ENST00000591914 ECSITQ9BQ95 431 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 NGBQ9NPG2 151 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 BEX4Q9NWD9 120 aaPredicted RBP24.01■■□□□ 1.43
SMAD4-213ENST00000591914 TAS2R16Q9NYV7 291 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 RASD1Q9Y272 281 aa24.01■■□□□ 1.43
SMAD4-213ENST00000591914 A0A087WUJ7 227 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 OR5H1A6NKK0 313 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 M0R3H8 397 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 PDLIM1O00151 329 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 OR2T1O43869 369 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 CD247P20963 164 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 CRYBA2P53672 197 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 FAPQ12884 760 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 STK11Q15831 433 aa24■■□□□ 1.43
SMAD4-213ENST00000591914 SWT1Q5T5J6 900 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms