RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ABHD12BQ7Z5M8 362 aaPredicted RBP15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 GPAT4Q86UL3 456 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 VRK2Q86Y07 508 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 POMGNT2Q8NAT1 580 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 OR9K2Q8NGE7 335 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 TMEM45BQ96B21 275 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 SF3B5Q9BWJ5 86 aaKnown RBP15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 TAPBPLQ9BX59 468 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 ZNF232Q9UNY5 417 aa15.73■□□□□ 0.11
PRKCSH-211ENST00000590098 STAB1Q9NY15 2570 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 TMEM247A6NEH6 219 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 KRT33AO76009 404 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 GKN3PP0CG01 181 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 ETFAP13804 333 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 CDH2P19022 906 aaPredicted RBP15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 WDR4P57081 412 aaKnown RBP15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 DSTNP60981 165 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 LARS2Q15031 903 aaKnown RBP15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 ZSWIM7Q19AV6 140 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 PDCD4Q53EL6 469 aaKnown RBP15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 HMBOX1Q6NT76 420 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 ZNF836Q6ZNA1 936 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 HIPK1Q86Z02 1210 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 OR10H5Q8NGA6 315 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 PIF1Q9H611 641 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 ARMC7Q9H6L4 198 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 RMND5AQ9H871 391 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 RAB21Q9UL25 225 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 PMF1-BGLAPU3KQ54 211 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 FBN3Q75N90 2809 aa15.72■□□□□ 0.11
PRKCSH-211ENST00000590098 TMEM120BA0PK00 339 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 AQP7P3A6NL99 342 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 A8MV72 311 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 A8MVM7 634 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 H7C417 338 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 SNNO75324 88 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 IFNA2P01563 188 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 BCHEP06276 602 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 TFPTP0C1Z6 253 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ZCCHC18P0CG32 403 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 NCF2P19878 526 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 APOBEC3AP31941 199 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ACAA2P42765 397 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 MAPK11Q15759 364 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ZIC4Q8N9L1 334 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 SPATA3Q8NHX4 192 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 SLC38A5Q8WUX1 472 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 HTRA1Q92743 480 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 AURKBQ96GD4 344 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ITCHQ96J02 903 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ZNF385AQ96PM9 386 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 TPT1P8Q9HAU6 139 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 SLC6A13Q9NSD5 602 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ADPRHL2Q9NX46 363 aa15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 THUMPD1Q9NXG2 353 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 ZNF443Q9Y2A4 671 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-211ENST00000590098 DSPPQ9NZW4 1301 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 YLPM1P49750 1951 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 GPRIN2O60269 458 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 VAMP5O95183 116 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 MVDP53602 400 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 SLC25A3Q00325 362 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 BNIP2Q12982 314 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 RNF220Q5VTB9 566 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 PODNL1Q6PEZ8 512 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 ZNF525Q8N782 197 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 FAM168AQ92567 244 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 TNFRSF13CQ96RJ3 184 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 TMEM45AQ9NWC5 275 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 NKIRAS1Q9NYS0 192 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 ZIM2Q9NZV7 527 aa15.7■□□□□ 0.1
PRKCSH-211ENST00000590098 A0A096LPI6 279 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 A0A0G2JPF8 293 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 HNRNPCL2B2RXH8 293 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 HNRNPCL3B7ZW38 293 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 ATP6V1G2-DDX39BF2Z307 99 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 HNRNPCL1O60812 293 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 HNRNPCL4P0DMR1 293 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 SLC25A16P16260 332 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 POLR2JP52435 117 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 TMEM249Q2WGJ8 235 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 CHRFAM7AQ494W8 412 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 SLC9B1Q4ZJI4 515 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 HIKESHIQ53FT3 197 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 C6orf10Q5SRN2 563 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 C1orf140Q5VVS0 124 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 MSANTD1Q6ZTZ1 278 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 CLIP4Q8N3C7 705 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 TMEM19Q96HH6 336 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 MAELQ96JY0 434 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 KCNS3Q9BQ31 491 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 SPATA9Q9BWV2 254 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 MANSC1Q9H8J5 431 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 OBP2BQ9NPH6 170 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 IFT52Q9Y366 437 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 ARFGEF3Q5TH69 2177 aa15.69■□□□□ 0.1
PRKCSH-211ENST00000590098 OR6C65A6NJZ3 312 aa15.68■□□□□ 0.1
PRKCSH-211ENST00000590098 ELOA3DA6NLF2 546 aaPredicted RBP15.68■□□□□ 0.1
PRKCSH-211ENST00000590098 ZNF587BE7ETH6 402 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms