RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 MPP4Q96JB8 637 aa20.65■□□□□ 0.9
LSM7-202ENST00000585395 EPYCQ99645 322 aa20.65■□□□□ 0.9
LSM7-202ENST00000585395 BTBD10Q9BSF8 475 aa20.65■□□□□ 0.9
LSM7-202ENST00000585395 TACO1Q9BSH4 297 aaKnown RBP20.65■□□□□ 0.9
LSM7-202ENST00000585395 RSPO3Q9BXY4 272 aaPredicted RBP20.65■□□□□ 0.9
LSM7-202ENST00000585395 PIGMQ9H3S5 423 aa20.65■□□□□ 0.9
LSM7-202ENST00000585395 A0A1W2PNR3 127 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 CPSF4LA6NMK7 179 aaKnown RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 CHP2O43745 196 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 EIF1BO60739 113 aaKnown RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 PLGP00747 810 aaPredicted RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 DIO1P49895 249 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 TAS2R41P59536 307 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 CBX1P83916 185 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 RNPS1Q15287 305 aaKnown RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 ZNF239Q16600 458 aaKnown RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 DEF8Q6ZN54 512 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 CYP4Z1Q86W10 505 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 FNDC9Q8TBE3 224 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 SLC38A4Q969I6 547 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 HSH2DQ96JZ2 352 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 NAA11Q9BSU3 229 aaPredicted RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 THTPAQ9BU02 230 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 RBM24Q9BX46 236 aaKnown RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 COQ10BQ9H8M1 238 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 DCAF13Q9NV06 445 aaKnown RBP20.64■□□□□ 0.89
LSM7-202ENST00000585395 ACTR3BQ9P1U1 418 aa20.64■□□□□ 0.89
LSM7-202ENST00000585395 A0A1W2PNV4 684 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 TMEM229AB2RXF0 380 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 ARPC2O15144 300 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 OR2T1O43869 369 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 OR5F1O95221 314 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 GPIP06744 558 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 THRBP10828 461 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 GTF2E2P29084 291 aaKnown RBP20.63■□□□□ 0.89
LSM7-202ENST00000585395 OR2B6P58173 313 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 ADAMTS16Q8TE57 1224 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 MCUR1Q96AQ8 359 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 TRIM15Q9C019 465 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 OR11A1Q9GZK7 315 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 GP6Q9HCN6 339 aa20.63■□□□□ 0.89
LSM7-202ENST00000585395 A0A087WUJ7 227 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 EBAG9O00559 213 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 DNAJC8O75937 253 aaPredicted RBP20.62■□□□□ 0.89
LSM7-202ENST00000585395 OR1E2P47887 323 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 CTBP2P56545 445 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 TRIM25Q14258 630 aaKnown RBP20.62■□□□□ 0.89
LSM7-202ENST00000585395 NPTX1Q15818 432 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 FBXL19-AS1Q494R0 122 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 C1orf140Q5VVS0 124 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 FCRLAQ7L513 359 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 GMPPAQ96IJ6 420 aaPredicted RBP20.62■□□□□ 0.89
LSM7-202ENST00000585395 LRGUKQ96M69 825 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 RNF122Q9H9V4 155 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 EMC9Q9Y3B6 208 aa20.62■□□□□ 0.89
LSM7-202ENST00000585395 FAM32AQ9Y421 112 aaKnown RBP20.62■□□□□ 0.89
LSM7-202ENST00000585395 TPST2O60704 377 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 PRKD3O94806 890 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 ITGA2P17301 1181 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 CDH12P55289 794 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 MFSD13AQ14CX5 517 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 FBXW10Q5XX13 1052 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 TTC33Q6PID6 262 aaPredicted RBP20.61■□□□□ 0.89
LSM7-202ENST00000585395 CCDC121Q6ZUS5 278 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 VTCN1Q7Z7D3 282 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 DHFR2Q86XF0 187 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 RBM45Q8IUH3 476 aaKnown RBP20.61■□□□□ 0.89
LSM7-202ENST00000585395 OR4D11Q8NGI4 311 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 PIGXQ8TBF5 258 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 ASB9Q96DX5 294 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 SLC41A3Q96GZ6 507 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 ARL5BQ96KC2 179 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 PRRC1Q96M27 445 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 TMEM43Q9BTV4 400 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 PRR14Q9BWN1 585 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 KLHL9Q9P2J3 617 aa20.61■□□□□ 0.89
LSM7-202ENST00000585395 TUBAL3A6NHL2 446 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 TNFRSF1BP20333 461 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 MSX2P35548 267 aaPredicted RBP20.6■□□□□ 0.89
LSM7-202ENST00000585395 ST3GAL3Q11203 375 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 OR6S1Q8NH40 331 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 RNF128Q8TEB7 428 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 SLC7A6OSQ96CW6 309 aaPredicted RBP20.6■□□□□ 0.89
LSM7-202ENST00000585395 PYURFQ96I23 114 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 WFDC6Q9BQY6 131 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 SRXN1Q9BYN0 137 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 SLC7A7Q9UM01 511 aa20.6■□□□□ 0.89
LSM7-202ENST00000585395 TRAV36DV7A0A075B6V5 113 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 PDE5AO76074 875 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 TRAP1Q12931 704 aaKnown RBP20.59■□□□□ 0.89
LSM7-202ENST00000585395 TMEM201Q5SNT2 666 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 VWA1Q6PCB0 445 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 MFSD8Q8NHS3 518 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 ROBO4Q8WZ75 1007 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 HS6ST2Q96MM7 605 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 FNDC11Q9BVV2 318 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 SLC19A3Q9BZV2 496 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 MMADHCQ9H3L0 296 aaPredicted RBP20.59■□□□□ 0.89
LSM7-202ENST00000585395 GALNT8Q9NY28 637 aa20.59■□□□□ 0.89
LSM7-202ENST00000585395 CRIM1Q9NZV1 1036 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms