RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 AQP7P3A6NL99 342 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 CCT8L1PA6NM43 557 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 MFN2O95140 757 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 PLAUP00749 431 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 HTR2AP28223 471 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 DMTNQ08495 405 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 TRMT5Q32P41 509 aaKnown RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 ALG10BQ5I7T1 473 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 C20orf204Q6ZNR8 217 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 ZNF433Q8N7K0 673 aaPredicted RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 LSMEM1Q8N8F7 131 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 SMYD1Q8NB12 490 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 OR9K2Q8NGE7 335 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 OR10A6Q8NH74 314 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 DNAJA4Q8WW22 397 aaPredicted RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 PIGTQ969N2 578 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 CCL19Q99731 98 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 SF3B5Q9BWJ5 86 aaKnown RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 PIF1Q9H611 641 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 CCDC134Q9H6E4 229 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 ESRP2Q9H6T0 727 aaKnown RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 KAT8Q9H7Z6 458 aaKnown RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 TMEM27Q9HBJ8 222 aa18.03■□□□□ 0.48
SS18-224ENST00000584083 TESQ9UGI8 421 aaKnown RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 RAI1Q7Z5J4 1906 aaPredicted RBP18.03■□□□□ 0.48
SS18-224ENST00000584083 M0QX08 132 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 NPIPB7O75200 414 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 RAD51DO75771 328 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 PNMTP11086 282 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 GTF2E2P29084 291 aaKnown RBP18.02■□□□□ 0.48
SS18-224ENST00000584083 MDH1P40925 334 aaKnown RBP18.02■□□□□ 0.48
SS18-224ENST00000584083 RPS5P46782 204 aaKnown RBP18.02■□□□□ 0.48
SS18-224ENST00000584083 PCBP3P57721 371 aaKnown RBP18.02■□□□□ 0.48
SS18-224ENST00000584083 PPA1Q15181 289 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 MAPRE2Q15555 327 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 ULK3Q6PHR2 472 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 C6orf89Q6UWU4 347 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 AAED1Q7RTV5 226 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 TGIF2LYQ8IUE0 185 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 SLC30A8Q8IWU4 369 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 MFSD8Q8NHS3 518 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 C12orf10Q9HB07 376 aa18.02■□□□□ 0.48
SS18-224ENST00000584083 MRASO14807 208 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 CLOCKO15516 846 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 SMPD2O60906 423 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 OPN1SWP03999 348 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 CD3EP07766 207 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 EGR4Q05215 589 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 TIMM23BQ5SRD1 257 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 NANOGP8Q6NSW7 305 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 NET1Q7Z628 596 aaPredicted RBP18.01■□□□□ 0.47
SS18-224ENST00000584083 RANBP3LQ86VV4 465 aaPredicted RBP18.01■□□□□ 0.47
SS18-224ENST00000584083 P2RY8Q86VZ1 359 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 SNX32Q86XE0 403 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 LRRC58Q96CX6 371 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 KTI12Q96EK9 354 aaPredicted RBP18.01■□□□□ 0.47
SS18-224ENST00000584083 SLC47A1Q96FL8 570 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 SH3GL1Q99961 368 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 TMEM204Q9BSN7 226 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 EVA1AQ9H8M9 152 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 NANOGQ9H9S0 305 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 SLC7A10Q9NS82 523 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 TAS2R16Q9NYV7 291 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 KLHL14Q9P2G3 628 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 MALT1Q9UDY8 824 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 RNF115Q9Y4L5 304 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 ARID1AO14497 2285 aa18.01■□□□□ 0.47
SS18-224ENST00000584083 LOC100653049A0A140TA62 436 aa18■□□□□ 0.47
SS18-224ENST00000584083 OR5H1A6NKK0 313 aa18■□□□□ 0.47
SS18-224ENST00000584083 BBIP1A8MTZ0 92 aa18■□□□□ 0.47
SS18-224ENST00000584083 KRT34O76011 436 aa18■□□□□ 0.47
SS18-224ENST00000584083 VAMP5O95183 116 aa18■□□□□ 0.47
SS18-224ENST00000584083 CD99P14209 185 aa18■□□□□ 0.47
SS18-224ENST00000584083 PCGF2P35227 344 aa18■□□□□ 0.47
SS18-224ENST00000584083 ADAM8P78325 824 aa18■□□□□ 0.47
SS18-224ENST00000584083 OR1Q1Q15612 314 aa18■□□□□ 0.47
SS18-224ENST00000584083 NCMAPQ5T1S8 102 aa18■□□□□ 0.47
SS18-224ENST00000584083 INTS11Q5TA45 600 aaKnown RBP18■□□□□ 0.47
SS18-224ENST00000584083 TSPO2Q5TGU0 170 aa18■□□□□ 0.47
SS18-224ENST00000584083 C9orf135Q5VTT2 229 aa18■□□□□ 0.47
SS18-224ENST00000584083 FAM91A1Q658Y4 838 aa18■□□□□ 0.47
SS18-224ENST00000584083 REP15Q6BDI9 236 aa18■□□□□ 0.47
SS18-224ENST00000584083 C5orf46Q6UWT4 87 aa18■□□□□ 0.47
SS18-224ENST00000584083 PATL1Q86TB9 770 aaKnown RBP18■□□□□ 0.47
SS18-224ENST00000584083 P3H2Q8IVL5 708 aa18■□□□□ 0.47
SS18-224ENST00000584083 ZIC4Q8N9L1 334 aa18■□□□□ 0.47
SS18-224ENST00000584083 SLC26A7Q8TE54 656 aa18■□□□□ 0.47
SS18-224ENST00000584083 AKAP1Q92667 903 aaKnown RBP eCLIP18■□□□□ 0.47
SS18-224ENST00000584083 SLC38A4Q969I6 547 aa18■□□□□ 0.47
SS18-224ENST00000584083 TMEM45BQ96B21 275 aa18■□□□□ 0.47
SS18-224ENST00000584083 ZNF385AQ96PM9 386 aaKnown RBP18■□□□□ 0.47
SS18-224ENST00000584083 PIP5K1AQ99755 562 aa18■□□□□ 0.47
SS18-224ENST00000584083 ECSITQ9BQ95 431 aa18■□□□□ 0.47
SS18-224ENST00000584083 PTDSS2Q9BVG9 487 aa18■□□□□ 0.47
SS18-224ENST00000584083 RASD1Q9Y272 281 aa18■□□□□ 0.47
SS18-224ENST00000584083 CAPN7Q9Y6W3 813 aa18■□□□□ 0.47
SS18-224ENST00000584083 FTCDNL1E5RQL4 147 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 M0R3H8 397 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 HS3ST1O14792 307 aa17.99■□□□□ 0.47
SS18-224ENST00000584083 OR2T1O43869 369 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms