RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KIF26AQ9ULI4 1882 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-206ENST00000581631 MROH7-TTC4A0A0A0MT08 1334 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 F8WDY8 70 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 OR1F1O43749 312 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 B4GALT2O60909 372 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 NEBLO76041 1014 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 IGLV3-19P01714 112 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 GAP43P17677 238 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 HNF1AP20823 631 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 CCND2P30279 289 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 CALCRP30988 508 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 BTCP35070 178 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 RFC4P35249 363 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 SLC26A3P40879 764 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 CSTF1Q05048 431 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 REG3AQ06141 175 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 PJVKQ0ZLH3 352 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 SNTB2Q13425 540 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 TMEM183BQ1AE95 376 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 ABCA11PQ4W5N1 156 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 C5orf47Q569G3 176 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 FAM71F2Q6NXP2 309 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 Q6ZN92 141 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 SLC26A11Q86WA9 606 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 TMEM183AQ8IXX5 376 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 CNNM3Q8NE01 707 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 CCDC54Q8NEL0 328 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 OR4K14Q8NGD5 310 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 UBALD1Q8TB05 177 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 PHF10Q8WUB8 498 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 HTR3CQ8WXA8 447 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 FRZBQ92765 325 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 CCDC47Q96A33 483 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 ASB9Q96DX5 294 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 PAGE5Q96GU1 130 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF578Q96N58 590 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 RIT2Q99578 217 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 DPH5Q9H2P9 285 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 RNF167Q9H6Y7 350 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 SLC17A5Q9NRA2 495 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 QPCTLQ9NXS2 382 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF226Q9NYT6 803 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 OPN4Q9UHM6 478 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 SLC25A15Q9Y619 301 aa1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-206ENST00000581631 IQANK1A0A1B0GTG1 560 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 A0A1W2PNV4 684 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RBMY1BA6NDE4 496 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RBMY1EA6NEQ0 496 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 ZSCAN12O43309 604 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 CD5LO43866 347 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 TM7SF2O76062 418 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 CTDNEP1O95476 244 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RHOXF2BP0C7M4 288 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RBMY1DP0C7P1 496 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RBMY1A1P0DJD3 496 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 NPR2P20594 1047 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 IL10P22301 178 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 ARRB1P49407 418 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 PDZK1IP1Q13113 114 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 KIAA0087Q14695 138 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RFX4Q33E94 735 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 SLC25A52Q3SY17 297 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 PARP15Q460N3 678 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 GGTA1PQ4G0N0 100 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 TMEM255AQ5JRV8 349 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 SAMD4BQ5PRF9 694 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 LY6G6FQ5SQ64 297 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 OR2G6Q5TZ20 316 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 TPGS2Q68CL5 300 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 KCNIP4Q6PIL6 250 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 Q6ZR03 302 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 PCP2Q8IVA1 136 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 FAM9BQ8IZU0 186 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 OR2L13Q8N349 312 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 CLDN19Q8N6F1 224 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 Q8N976 141 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 CMTM7Q96FZ5 175 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 SEC22AQ96IW7 307 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 SPIN2AQ99865 258 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 SPIN2BQ9BPZ2 258 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 RIOK1Q9BRS2 568 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 TMEM117Q9H0C3 514 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 DEFB127Q9H1M4 99 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 C1orf21Q9H246 121 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 POPDC2Q9HBU9 364 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 ZFP14Q9HCL3 533 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 ZDHHC4Q9NPG8 344 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 CLCF1Q9UBD9 225 aa1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 YTHDF2Q9Y5A9 579 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-206ENST00000581631 LRP4O75096 1905 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 IGLV11-55A0A075B6I3 123 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NSG1A0A0A6YYJ2 146 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 A0A0U1RQS6 177 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 COLCA2A8K830 154 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NPIPA7E9PJI5 369 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 UGT1A9O60656 530 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 N4BP1O75113 896 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ADCY5O95622 1261 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 OPN1MWP04001 364 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms