RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CUBNO60494 3623 aa9.26□□□□□ -0.93
RFFL-209ENST00000581265 CDHR4A6H8M9 788 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 AQP7P3A6NL99 342 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 ATP6V1G2-DDX39BF2Z307 99 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 NDUFS8O00217 210 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 TM9SF1O15321 606 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 LMX1BO60663 402 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 AKR7A3O95154 331 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 VAMP5O95183 116 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 PGRP06401 933 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 NR2F1P10589 423 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 CXCR1P25024 350 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 ACAA2P42765 397 aaKnown RBP9.25□□□□□ -0.93
RFFL-209ENST00000581265 GZMKP49863 264 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 UFM1P61960 85 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 CEACAM7Q14002 265 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 TMEM225Q6GV28 225 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 ZNF621Q6ZSS3 439 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 ABHD12BQ7Z5M8 362 aaPredicted RBP9.25□□□□□ -0.93
RFFL-209ENST00000581265 WDR60Q8WVS4 1066 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 AURKBQ96GD4 344 aaPredicted RBP9.25□□□□□ -0.93
RFFL-209ENST00000581265 OR52E6Q96RD3 313 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 SHARPINQ9H0F6 387 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 RLIMQ9NVW2 624 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 TMEM45AQ9NWC5 275 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 MOKQ9UQ07 419 aa9.25□□□□□ -0.93
RFFL-209ENST00000581265 OR6C65A6NJZ3 312 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 A8MVM7 634 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 KLF11O14901 512 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 KCNAB3O43448 404 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 LY6HO94772 140 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 KRT75O95678 551 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 ALDOCP09972 364 aaKnown RBP9.24□□□□□ -0.93
RFFL-209ENST00000581265 CDH2P19022 906 aaPredicted RBP9.24□□□□□ -0.93
RFFL-209ENST00000581265 IL12AP29459 219 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 SERPINF1P36955 418 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 CDKN2CP42773 168 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 NR4A2P43354 598 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 PDLIM4P50479 330 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 P2RY4P51582 365 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 SRSF2Q01130 221 aaKnown RBP9.24□□□□□ -0.93
RFFL-209ENST00000581265 STX3Q13277 289 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 MPP2Q14168 576 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 OR7A5Q15622 319 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 MAPK11Q15759 364 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 ZSWIM7Q19AV6 140 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 HIKESHIQ53FT3 197 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 COX20Q5RI15 118 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 LIPNQ5VXI9 398 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 WBP2NLQ6ICG8 309 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 ANKRD16Q6P6B7 361 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 KLHL24Q6TFL4 600 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 CREB3L2Q70SY1 520 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 SPATA19Q7Z5L4 167 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 PEX5LQ8IYB4 626 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 FAM169BQ8N8A8 192 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 BCL2L2Q92843 193 aaPredicted RBP9.24□□□□□ -0.93
RFFL-209ENST00000581265 FBXO17Q96EF6 278 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 ZNF317Q96PQ6 595 aaPredicted RBP9.24□□□□□ -0.93
RFFL-209ENST00000581265 PNPOQ9NVS9 261 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 AIG1Q9NVV5 245 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 GPR45Q9Y5Y3 372 aa9.24□□□□□ -0.93
RFFL-209ENST00000581265 A0A096LPI6 279 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 IGHV1-18A0A0C4DH31 117 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 LOC390937A0A1W2PQ73 354 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 B9A039 149 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 RGS16O15492 202 aaPredicted RBP9.23□□□□□ -0.93
RFFL-209ENST00000581265 NPIPB7O75200 414 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 CRYAAP02489 173 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 GSNP06396 782 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 TFPTP0C1Z6 253 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 GKN3PP0CG01 181 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 HOXB1P14653 301 aaPredicted RBP9.23□□□□□ -0.93
RFFL-209ENST00000581265 BGNP21810 368 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 MVDP53602 400 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 NME5P56597 212 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 COPZ1P61923 177 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 C3orf36Q3SXR2 165 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 KRT71Q3SY84 523 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 TBRG1Q3YBR2 411 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 TNFAIP8L3Q5GJ75 292 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 WDR93Q6P2C0 686 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 C12orf54Q6X4T0 127 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 GPAT4Q86UL3 456 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 LSRQ86X29 649 aaPredicted RBP9.23□□□□□ -0.93
RFFL-209ENST00000581265 EPHX4Q8IUS5 362 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 MREGQ8N565 214 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 ARIH2OSQ8N7S6 290 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 GLB1L3Q8NCI6 653 aaPredicted RBP9.23□□□□□ -0.93
RFFL-209ENST00000581265 OR1K1Q8NGR3 316 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 OR52P1PQ8NH57 321 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 MAGEE2Q8TD90 523 aaPredicted RBP9.23□□□□□ -0.93
RFFL-209ENST00000581265 MSI2Q96DH6 328 aaKnown RBP9.23□□□□□ -0.93
RFFL-209ENST00000581265 FOXN4Q96NZ1 517 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 SORCS2Q96PQ0 1159 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 SLC38A2Q96QD8 506 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 KATNB1Q9BVA0 655 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 PRR14Q9BWN1 585 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 TAPBPLQ9BX59 468 aa9.23□□□□□ -0.93
RFFL-209ENST00000581265 MOV10Q9HCE1 1003 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms