RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-215	ENST00000573550	SMIM14	Q96QK8	99 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CTRC	Q99895	268 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TM6SF2	Q9BZW4	377 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CCDC90B	Q9GZT6	254 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	REEP4	Q9H6H4	257 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	C3orf14	Q9HBI5	128 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	INIP	Q9NRY2	104 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CRNN	Q9UBG3	495 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	STUB1	Q9UNE7	303 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	ANGPT4	Q9Y264	503 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	GRIP1	Q9Y3R0	1128 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TRIM17	Q9Y577	477 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550		U3KQV3	271 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	DSPP	Q9NZW4	1301 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PCM1	Q15154	2024 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	DOCK6	Q96HP0	2047 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	TRAV19	A0A0A6YYK7	116 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	IQCM	A0A1B0GVH7	501 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC5A10	A0PJK1	596 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	IRGM	A1A4Y4	181 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	HTR3E	A5X5Y0	456 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	MGAT4D	A6NG13	374 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ARHGEF33	A8MVX0	844 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	MYO1G	B0I1T2	1018 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	hCG_2039718	K7EN88	272 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	DVL1	O14640	695 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PRRG1	O14668	218 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	HAT1	O14929	419 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SMAD9	O15198	467 aa	Known RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PLPP2	O43688	288 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SYNGR3	O43761	229 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PCDH7	O60245	1069 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	MITF	O75030	526 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PDE9A	O76083	593 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	OR2C1	O95371	312 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ANXA4	P09525	319 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ADORA3	P0DMS8	318 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ANXA7	P20073	488 aa	Known RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	CD22	P20273	847 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	IDS	P22304	550 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PRKACG	P22612	351 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	S100A1	P23297	94 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	HLA-F	P30511	346 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	RRM2	P31350	389 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	CA5A	P35218	305 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC15A1	P46059	708 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	RGS6	P49758	472 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	EIF2B2	P49770	351 aa	Known RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ARFIP1	P53367	373 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	DVL1P1	P54792	670 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	UGT2B15	P54855	530 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PRMT2	P55345	433 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SMIM11A	P58511	58 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	LINC01547	P58512	204 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	VBP1	P61758	197 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	NCS1	P62166	190 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SNRPG	P62308	76 aa	Known RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	IFITM3	Q01628	133 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SPOCK1	Q08629	439 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	RIPPLY1	Q0D2K3	151 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	DGCR6	Q14129	220 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	DOC2A	Q14183	400 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SIM2	Q14190	667 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	GPNMB	Q14956	572 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	MICA	Q29983	383 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ZNF658B	Q4V348	819 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	XKR6	Q5GH73	641 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SPANXN2	Q5MJ10	180 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	MED27	Q6P2C8	311 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	AGTRAP	Q6RW13	159 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	MBOAT1	Q6ZNC8	495 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	CFAP77	Q6ZQR2	320 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ZNF621	Q6ZSS3	439 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PLEKHM3	Q6ZWE6	761 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	VTCN1	Q7Z7D3	282 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	GALNT5	Q7Z7M9	940 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	CCDC190	Q86UF4	302 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	THOC6	Q86W42	341 aa	Known RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ANKRD46	Q86W74	232 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	RNF130	Q86XS8	419 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	OR7G3	Q8NG95	312 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	CLHC1	Q8NHS4	586 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ZNF675	Q8TD23	568 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	APOBEC4	Q8WW27	367 aa	Known RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	RASSF5	Q8WWW0	418 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	PROX1	Q92786	737 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	DNASE1L2	Q92874	299 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC35B4	Q969S0	331 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	TMEM159	Q96B96	161 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	OTUB2	Q96DC9	234 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ZNF514	Q96K75	400 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	LINC00615	Q96LM1	132 aa	Predicted RBP	4.35	□□□□□ -1.71
CDC27-215	ENST00000573550		Q96MT0	163 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	FOPNL	Q96NB1	174 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	ZNF558	Q96NG5	402 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	OR2A14	Q96R47	310 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	P2RY13	Q9BPV8	354 aa		4.35	□□□□□ -1.71
CDC27-215	ENST00000573550	TAPBPL	Q9BX59	468 aa		4.35	□□□□□ -1.71

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