RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 MEF2DQ14814 521 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 TAF1AQ15573 450 aaPredicted RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 AGKQ53H12 422 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 PIGGQ5H8A4 983 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SAMD4BQ5PRF9 694 aaKnown RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 ZNF678Q5SXM1 525 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 OGFRL1Q5TC84 451 aaPredicted RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 SDHAF4Q5VUM1 108 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 LIPKQ5VXJ0 399 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 LPCAT4Q643R3 524 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 HACD2Q6Y1H2 254 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 GLT6D1Q7Z4J2 308 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 CUZD1Q86UP6 607 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 AMZ2Q86W34 360 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SPATA24Q86W54 205 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 NR2C2APQ86WQ0 139 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 MFSD6LQ8IWD5 586 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SLC22A15Q8IZD6 547 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 LSMEM2Q8N112 164 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 LRRC43Q8N309 656 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 PARP8Q8N3A8 854 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 RAB42Q8N4Z0 105 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 MINDY2Q8NBR6 621 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 FAM71CQ8NEG0 241 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 OR52B4Q8NGK2 314 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 OR52K2Q8NGK3 314 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 OR6S1Q8NH40 331 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 RPLP0P6Q8NHW5 317 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 RHEBL1Q8TAI7 183 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 STAG3L4Q8TBR4 150 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 RAET1EQ8TD07 263 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 BRSK1Q8TDC3 778 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SELENOMQ8WWX9 145 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 PHYHIPQ92561 330 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 HIST1H2ACQ93077 130 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBR1-211ENST00000569971 ROPN1LQ96C74 230 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 C19orf60Q96EN9 201 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 TMA16Q96EY4 203 aaKnown RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 MAGED4Q96JG8 741 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 DEFB118Q96PH6 123 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 UHRF2Q96PU4 802 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 PSKH2Q96QS6 385 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 ERVK-6Q9BXR3 956 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 YIPF3Q9GZM5 350 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 ALG9Q9H6U8 611 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 MEAF6Q9HAF1 191 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SDF2L1Q9HCN8 221 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SLC35D1Q9NTN3 355 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 MED17Q9NVC6 651 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 NLE1Q9NVX2 485 aaPredicted RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 GID8Q9NWU2 228 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 TAS2R13Q9NYV9 303 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 ADA2Q9NZK5 511 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 ERVK-18Q9QC07 812 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 PSMD13Q9UNM6 376 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 DIMT1Q9UNQ2 313 aaKnown RBP3.17□□□□□ -1.9
UBR1-211ENST00000569971 PPP1R3CQ9UQK1 317 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 FIS1Q9Y3D6 152 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 THSD7BQ9C0I4 1608 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 PTPRDP23468 1912 aa3.17□□□□□ -1.9
UBR1-211ENST00000569971 SHROOM3Q8TF72 1996 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 CASP8AP2Q9UKL3 1982 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 NYNRINQ9P2P1 1898 aaKnown RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 C15orf61A6NNL5 157 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 SUPT3HB4E1H0 165 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 E5RI56 91 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 H0YJX3 145 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 AZIN1O14977 448 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 ANGPT2O15123 496 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 SURF4O15260 269 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 STX7O15400 261 aaKnown RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 SUPT3HO75486 399 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 WISP3O95389 354 aaPredicted RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 ANGPTL1O95841 491 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 FGF4P08620 206 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 ZDHHC11BP0C7U3 371 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 PATE4P0C8F1 98 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 IDO1P14902 403 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 CD1DP15813 335 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 GNB3P16520 340 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 XRCC1P18887 633 aaPredicted RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 PAX7P23759 505 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 ACAA2P42765 397 aaKnown RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 PSMD8P48556 350 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 ERFP50548 548 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 STC1P52823 247 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 PLK1P53350 603 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 PRMT2P55345 433 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 TRA2BP62995 288 aaKnown RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 MRPS22P82650 360 aaKnown RBP3.16□□□□□ -1.9
UBR1-211ENST00000569971 MYBPC1Q00872 1141 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 HSPA14Q0VDF9 509 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 FUT7Q11130 342 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 HYAL1Q12794 435 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 BNIP2Q12982 314 aa3.16□□□□□ -1.9
UBR1-211ENST00000569971 SCGB2A2Q13296 93 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms