RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 C1orf140Q5VVS0 124 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 DHRS4L2Q6PKH6 230 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 CASP12Q6UXS9 341 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 YTHDF3Q7Z739 585 aaKnown RBP6.88□□□□□ -1.31
CDH3-209ENST00000569080 PTOV1Q86YD1 416 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 ZNF100Q8IYN0 542 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 CADM2Q8N3J6 435 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 DPP10Q8N608 796 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 TMEM99Q8N816 258 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 OR9K2Q8NGE7 335 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 OR52E4Q8NGH9 312 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 DYDC1Q8WWB3 177 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 THOC1Q96FV9 657 aaKnown RBP6.88□□□□□ -1.31
CDH3-209ENST00000569080 C18orf12Q96KH6 178 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 ZNF385AQ96PM9 386 aaKnown RBP6.88□□□□□ -1.31
CDH3-209ENST00000569080 WFDC6Q9BQY6 131 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 SF3B5Q9BWJ5 86 aaKnown RBP6.88□□□□□ -1.31
CDH3-209ENST00000569080 RAD21L1Q9H4I0 556 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 ESRP2Q9H6T0 727 aaKnown RBP6.88□□□□□ -1.31
CDH3-209ENST00000569080 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 ZNF446Q9NWS9 450 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 ASB6Q9NWX5 421 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 TAS2R16Q9NYV7 291 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 B3GAT1Q9P2W7 334 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 IFT52Q9Y366 437 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 MAGED1Q9Y5V3 778 aaPredicted RBP6.88□□□□□ -1.31
CDH3-209ENST00000569080 SLC25A15Q9Y619 301 aa6.88□□□□□ -1.31
CDH3-209ENST00000569080 A0A1B0GWA3 101 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 TMEM247A6NEH6 219 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 TRIM64A6NGJ6 449 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 TRIM64BA6NI03 449 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 FXYD1O00168 92 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 CLOCKO15516 846 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 TPST2O60704 377 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 MRPL33O75394 65 aaKnown RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 CD3EP07766 207 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 INHBBP09529 407 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 PPIBP23284 216 aaKnown RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 CXCR1P25024 350 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 CRYBA2P53672 197 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 DMTNQ08495 405 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 FAPQ12884 760 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 SCARB2Q14108 478 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 RUNDC3AQ59EK9 446 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 ALKBH2Q6NS38 261 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 CGB2Q6NT52 195 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 REEP3Q6NUK4 255 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 B3GLCTQ6Y288 498 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 LINGO2Q7L985 606 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 SSX8Q7RTT4 187 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 NET1Q7Z628 596 aaPredicted RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 DHDDSQ86SQ9 333 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 BIVMQ86UB2 503 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 DTX2Q86UW9 622 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 P2RY8Q86VZ1 359 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 C17orf78Q8N4C9 275 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 WDR31Q8NA23 367 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 C1orf162Q8NEQ5 155 aaPredicted RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 STK35Q8TDR2 534 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 TMEM171Q8WVE6 324 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 FBXW5Q969U6 566 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 KTI12Q96EK9 354 aaPredicted RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 BOD1Q96IK1 185 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 Q96MF0 132 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 MUS81Q96NY9 551 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 NAA11Q9BSU3 229 aaPredicted RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 PIF1Q9H611 641 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 C12orf10Q9HB07 376 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 NPHS2Q9NP85 383 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 ARGLU1Q9NWB6 273 aaPredicted RBP6.87□□□□□ -1.31
CDH3-209ENST00000569080 SEC14L4Q9UDX3 406 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 DCTN4Q9UJW0 460 aa6.87□□□□□ -1.31
CDH3-209ENST00000569080 CSPG4Q6UVK1 2322 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 A0A0B4J2E0 115 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 A0A1B0GX12 115 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 A0A1W2PR80 420 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 H7C1Q1 480 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 FBP2O00757 339 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 ABCD4O14678 606 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 ARHGEF9O43307 516 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 ZNF432O94892 652 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 MFN2O95140 757 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 AHSA1O95433 338 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 CD8AP01732 235 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 PNMTP11086 282 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 NCF2P19878 526 aaPredicted RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 AQP1P29972 269 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 SELENOPP49908 381 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 GZMMP51124 257 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 MTPNP58546 118 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 COPZ1P61923 177 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 RPS4XP62701 263 aaKnown RBP6.86□□□□□ -1.31
CDH3-209ENST00000569080 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 LGALS3BPQ08380 585 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 C11orf71Q6IPW1 123 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 DNM1P46Q6ZS02 220 aa6.86□□□□□ -1.31
CDH3-209ENST00000569080 CREB3L2Q70SY1 520 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms