RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SMIM11AP58511 58 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 DGCR6Q14129 220 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 PON3Q15166 354 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 OR7A5Q15622 319 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 FAM69AQ5T7M9 428 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 OR2T5Q6IEZ7 315 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 PLXDC2Q6UX71 529 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 RPTNQ6XPR3 784 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 LINC00114Q6XXX2 140 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 B3GNT6Q6ZMB0 384 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 ZNF730Q6ZMV8 503 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 ZNF771Q7L3S4 317 aaPredicted RBP10.28□□□□□ -0.76
KARS-207ENST00000566560 P4HA3Q7Z4N8 544 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 ALDH16A1Q8IZ83 802 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 RPRMLQ8N4K4 120 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 OR2T29Q8NH02 315 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 OR52J3Q8NH60 311 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 PFN4Q8NHR9 129 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 TMEM239Q8WW34 195 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 ACOT11Q8WXI4 607 aaPredicted RBP10.28□□□□□ -0.76
KARS-207ENST00000566560 OSTF1Q92882 214 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 SLCO4A1Q96BD0 722 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 ZHX1-C8orf76Q96EF9 292 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 HS6ST2Q96MM7 605 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 PTDSS2Q9BVG9 487 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 SLC19A3Q9BZV2 496 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 DENND2DQ9H6A0 471 aaPredicted RBP10.28□□□□□ -0.76
KARS-207ENST00000566560 REEP1Q9H902 201 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 CCM2LQ9NUG4 571 aaPredicted RBP10.28□□□□□ -0.76
KARS-207ENST00000566560 MED31Q9Y3C7 131 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 ZNF175Q9Y473 711 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 FAM215AQ9Y5M1 114 aa10.28□□□□□ -0.76
KARS-207ENST00000566560 DIDO1Q9BTC0 2240 aaKnown RBP10.27□□□□□ -0.76
KARS-207ENST00000566560 MED12LQ86YW9 2145 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 CD8B2A6NJW9 211 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 LIPT2A6NK58 231 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 KDM4EB2RXH2 506 aaPredicted RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 DNPH1O43598 174 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 RRP9O43818 475 aaKnown RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 TIPRLO75663 272 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 CST1P01037 141 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 HOXD4P09016 255 aaPredicted RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 PLA2G2AP14555 144 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 RAC3P60763 192 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 SLC35A1P78382 337 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 EIF2S3LQ2VIR3 472 aaKnown RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 NSUN5P2Q63ZY6 315 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 RTL6Q6ICC9 239 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 ADGRE4PQ86SQ3 457 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 NRMQ8IXM6 262 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 PAPD5Q8NDF8 572 aaKnown RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 MFSD8Q8NHS3 518 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 FNDC9Q8TBE3 224 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 SLC7A13Q8TCU3 470 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 PYDC1Q8WXC3 89 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 SLC25A36Q96CQ1 311 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 PRRG4Q9BZD6 226 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 KLHL4Q9C0H6 718 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 KRCC1Q9NPI7 259 aaPredicted RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 VNN3Q9NY84 501 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 C6orf203Q9P0P8 240 aaPredicted RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 SAMHD1Q9Y3Z3 626 aaKnown RBP10.27□□□□□ -0.77
KARS-207ENST00000566560 LYVE1Q9Y5Y7 322 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 MYO18BQ8IUG5 2567 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 MYO7BQ6PIF6 2116 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 PCNX1Q96RV3 2341 aa10.27□□□□□ -0.77
KARS-207ENST00000566560 A0A087WUU8 490 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 IGHV3-15A0A0B4J1V0 119 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 MBD3L4A6NDZ8 208 aaPredicted RBP10.26□□□□□ -0.77
KARS-207ENST00000566560 MBD3L3A6NE82 208 aaPredicted RBP10.26□□□□□ -0.77
KARS-207ENST00000566560 MBD3L5A6NJ08 208 aaPredicted RBP10.26□□□□□ -0.77
KARS-207ENST00000566560 E9PLN8 166 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 TNFRSF11BO00300 401 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 CCL21O00585 134 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 GNGT2O14610 69 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 SMAD9O15198 467 aaKnown RBP10.26□□□□□ -0.77
KARS-207ENST00000566560 OR2T1O43869 369 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 ENTPD5O75356 428 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 KRT36O76013 467 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 TGM6O95932 706 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 MT-ATP6P00846 226 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 FCGR1AP12314 374 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 IFI30P13284 250 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 KLK2P20151 261 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 FPR1P21462 350 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 ENPP1P22413 925 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 NUP107P57740 925 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 MFSD13AQ14CX5 517 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 ZNF74Q16587 644 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 EXOC3L2Q2M3D2 409 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 ABLIM2Q6H8Q1 611 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 ZFP1Q6P2D0 407 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 PODNL1Q6PEZ8 512 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 NCCRP1Q6ZVX7 275 aaPredicted RBP10.26□□□□□ -0.77
KARS-207ENST00000566560 MBOAT2Q6ZWT7 520 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 FCRLAQ7L513 359 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 RRM2BQ7LG56 351 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 FJX1Q86VR8 437 aa10.26□□□□□ -0.77
KARS-207ENST00000566560 OR4K5Q8NGD3 323 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms