RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TIGD3Q6B0B8 471 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 KDELC1Q6UW63 502 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 UQCC3Q6UW78 93 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 HSDL2Q6YN16 418 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 DHDDSQ86SQ9 333 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 C6orf223Q8N319 242 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 Q8N7P7 452 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 CCDC71LQ8N9Z2 235 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 DCAF4L2Q8NA75 395 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 OR8J1Q8NGP2 316 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 BRSK1Q8TDC3 778 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 FAM151AQ8WW52 585 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 MTMR9Q96QG7 549 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 HIST1H4GQ99525 98 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 COPS8Q99627 209 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 MRPL45Q9BRJ2 306 aaKnown RBP3.05□□□□□ -1.92
CHD9-215ENST00000565442 PARD6BQ9BYG5 372 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 YY1AP1Q9H869 796 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 NHEJ1Q9H9Q4 299 aaPredicted RBP3.05□□□□□ -1.92
CHD9-215ENST00000565442 BFARQ9NZS9 450 aa3.05□□□□□ -1.92
CHD9-215ENST00000565442 PLEKHG1Q9ULL1 1385 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 NSG1A0A0A6YYJ2 146 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 A0A1B0GVL5 298 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 PSMB11A5LHX3 300 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 A8MUA0 341 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 H0Y9J4 135 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 NBR2O15453 112 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 HCRTR1O43613 425 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 KLK3P07288 261 aaPredicted RBP3.04□□□□□ -1.92
CHD9-215ENST00000565442 CAPN1P07384 714 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 ZNF853P0CG23 659 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 DDOSTP39656 456 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 DUSP3P51452 185 aaPredicted RBP3.04□□□□□ -1.92
CHD9-215ENST00000565442 GPM6AP51674 278 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 PRPS1P60891 318 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 ASPHQ12797 758 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 PLD1Q13393 1074 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 OXA1LQ15070 435 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 NSDHLQ15738 373 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 PARP15Q460N3 678 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 C1orf100Q5SVJ3 147 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 C11orf71Q6IPW1 123 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 Q6ZN92 141 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 EFL1Q7Z2Z2 1120 aaKnown RBP3.04□□□□□ -1.92
CHD9-215ENST00000565442 SLC26A11Q86WA9 606 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 C20orf203Q8NBC4 194 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 BHLHE23Q8NDY6 225 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 NEIL3Q8TAT5 605 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 FAM110BQ8TC76 370 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 MAGEE2Q8TD90 523 aaPredicted RBP3.04□□□□□ -1.92
CHD9-215ENST00000565442 UFD1Q92890 307 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 C10orf35Q96D05 121 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 CXorf40BQ96DE9 158 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 OXGR1Q96P68 337 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 SELENOIQ9C0D9 397 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 ACTR6Q9GZN1 396 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 RNF167Q9H6Y7 350 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 LRRC40Q9H9A6 602 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 SEC14L3Q9UDX4 400 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 ASF1AQ9Y294 204 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 CDH10Q9Y6N8 788 aa3.04□□□□□ -1.92
CHD9-215ENST00000565442 ATP10AO60312 1499 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 PCP4L1A6NKN8 68 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 MPHOSPH10O00566 681 aaKnown RBP3.03□□□□□ -1.92
CHD9-215ENST00000565442 CXCL11O14625 94 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 TIMM8AO60220 97 aaPredicted RBP3.03□□□□□ -1.92
CHD9-215ENST00000565442 ZNF861PO60384 105 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 HTR1EP28566 365 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 DRD3P35462 400 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 WNT4P56705 351 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 CDK16Q00536 496 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 KLHL38Q2WGJ6 581 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 TMIGD1Q6UXZ0 262 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 RFLNAQ6ZTI6 216 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 ECHDC2Q86YB7 292 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 KRTAP11-1Q8IUC1 163 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 SLC34A3Q8N130 599 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 LRRC75A-AS1Q8N1F1 130 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 NKAPP1Q8N9T2 125 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 OR51S1Q8NGJ8 323 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 UCN3Q969E3 161 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 TCEANC2Q96MN5 208 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 C20orf85Q9H1P6 137 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 ASB8Q9H765 288 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 SLC25A22Q9H936 323 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 MCCC2Q9HCC0 563 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 ANAPC11Q9NYG5 84 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 NYAP2Q9P242 653 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 EXTL2Q9UBQ6 330 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 TMCO1Q9UM00 188 aa3.03□□□□□ -1.92
CHD9-215ENST00000565442 PANO1I0J062 215 aa3.02□□□□□ -1.93
CHD9-215ENST00000565442 HSD17B6O14756 317 aa3.02□□□□□ -1.93
CHD9-215ENST00000565442 NPIPB7O75200 414 aa3.02□□□□□ -1.93
CHD9-215ENST00000565442 KLF8O95600 359 aaPredicted RBP3.02□□□□□ -1.93
CHD9-215ENST00000565442 KIR2DS4P43632 304 aa3.02□□□□□ -1.93
CHD9-215ENST00000565442 VDAC2P45880 294 aaPredicted RBP3.02□□□□□ -1.93
CHD9-215ENST00000565442 CEBPDP49716 269 aaPredicted RBP3.02□□□□□ -1.93
CHD9-215ENST00000565442 KPNA2P52292 529 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms