RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 KLHL7Q8IXQ5 586 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF614Q8N883 585 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 FAM71CQ8NEG0 241 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 FAM76AQ8TAV0 307 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM234Q8WY98 164 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 SLC25A28Q96A46 364 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ARL8AQ96BM9 186 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 RAB39BQ96DA2 213 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF75AQ96N20 296 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM237Q96Q45 408 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ALKBH3Q96Q83 286 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 KCNA7Q96RP8 456 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 GPA33Q99795 319 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 VPS11Q9H270 941 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF385DQ9H6B1 395 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 GRHL1Q9NZI5 618 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM181Q9P2C4 612 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 SNX12Q9UMY4 172 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 CMAHPQ9Y471 501 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 CCL27Q9Y4X3 112 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 TIMM22Q9Y584 194 aa6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 SOX21Q9Y651 276 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-206ENST00000563343 DOCK11Q5JSL3 2073 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 TET2Q6N021 2002 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PPIAL4EA0A075B759 164 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PPIAL4CA0A0B4J2A2 164 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 ZC3H12DA2A288 527 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PPIAL4DF5H284 164 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 TIMM23O14925 209 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 TRAF3IP2O43734 574 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 RSL1D1O76021 490 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PPIAL4FP0DN26 164 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 NR4A1P22736 598 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 GLRXP35754 106 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PGM1P36871 562 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 MAGEB1P43366 347 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SELENOPP49908 381 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SERPINB8P50452 374 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 P2RY4P51582 365 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 FOXA1P55317 472 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PDE7AQ13946 482 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF141Q15928 474 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 FXNQ16595 210 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 AP1ARQ63HQ0 302 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 OLFML2AQ68BL7 652 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 REP15Q6BDI9 236 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 NOXRED1Q6NXP6 359 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 C16orf87Q6PH81 154 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PAQR6Q6TCH4 344 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 AAED1Q7RTV5 226 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 GRINAQ7Z429 371 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 ABHD12BQ7Z5M8 362 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 RELL1Q8IUW5 271 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SLC35F6Q8N357 371 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 BHLHE22Q8NFJ8 381 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 OR9K2Q8NGE7 335 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 ZFP28Q8NHY6 868 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SDF2Q99470 211 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SYT3Q9BQG1 590 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SF3B5Q9BWJ5 86 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 NMUR2Q9GZQ4 415 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PIF1Q9H611 641 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 MOV10Q9HCE1 1003 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 ZCCHC3Q9NUD5 404 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 LEF1Q9UJU2 399 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 MID2Q9UJV3 735 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 PPP2R2CQ9Y2T4 447 aa6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SPIN1Q9Y657 262 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-206ENST00000563343 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF587BE7ETH6 402 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 G3V4G9 280 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 RPL36A-HNRNPH2H7BZ11 118 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 ANKRD28O15084 1053 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SCAMP2O15127 329 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 CDC14BO60729 498 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 EIF1BO60739 113 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 UPK3AO75631 287 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 UGT2B17O75795 530 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 CYP7B1O75881 506 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SUPT7LO94864 414 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 NGFP01138 241 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 PRB2P02812 416 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 ENO1P06733 434 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 UBTFL6P0CB48 400 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 NAT2P11245 290 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF35P13682 527 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SELEP16581 610 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 EFNA1P20827 205 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 FKBP2P26885 142 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 STX2P32856 288 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 CRYBB2P43320 205 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SLC35A1P78382 337 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 MAPK14Q16539 360 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SPDYAQ5MJ70 313 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 OTUD3Q5T2D3 398 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 EMBQ6PCB8 327 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms