RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 UGT3A1Q6NUS8 523 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ADAM5Q6NVV9 412 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 RGMBQ6NW40 437 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 Q6ZSR3 168 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ASCL5Q7RTU5 278 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 APTXQ7Z2E3 356 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 CD163Q86VB7 1156 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TRAPPC5Q8IUR0 188 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ERI1Q8IV48 349 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 NPAS3Q8IXF0 933 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LGI2Q8N0V4 545 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LINC00528Q8N1L1 170 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TMEM251Q8N6I4 163 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TMEM163Q8TC26 289 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 C18orf25Q96B23 403 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 MS4A14Q96JA4 679 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 WDR92Q96MX6 357 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 OR2V2Q96R30 315 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 BARHL1Q9BZE3 327 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 KIF25Q9UIL4 384 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ABT1Q9ULW3 272 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 TP53TG5Q9Y2B4 290 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ACTL7BQ9Y614 415 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 V9GYY9 64 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 DLG5Q8TDM6 1919 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 MYH13Q9UKX3 1938 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CD163L1Q9NR16 1453 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 IGLON5A6NGN9 336 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 H0YL77 283 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CLDN34H7C241 214 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 UBDO15205 165 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 XPNPEP2O43895 674 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 WISP1O95388 367 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 DBHP09172 617 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 OCM2P0CE71 109 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 MYOGP15173 224 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 OGNP20774 298 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 CD1CP29017 333 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CCR7P32248 378 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CLDN12P56749 244 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 HMGCS1Q01581 520 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SEMG2Q02383 582 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 C2orf80Q0P641 193 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 FOXL1Q12952 345 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 FZD5Q13467 585 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 MEP1AQ16819 746 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CENPUQ71F23 418 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 NT5DC3Q86UY8 548 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 INO80EQ8NBZ0 244 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 OR9Q2Q8NGE9 314 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 OR56A4Q8NGH8 313 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 FNDC8Q8TC99 324 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ISOC2Q96AB3 205 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 RAB39BQ96DA2 213 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 PRMT6Q96LA8 375 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 ZNF512Q96ME7 567 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 MCCC1Q96RQ3 725 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 TTYH2Q9BSA4 534 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 UCK2Q9BZX2 261 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SAR1BQ9Y6B6 198 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 MEGF6O75095 1541 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 KIAA1551Q9HCM1 1747 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PDS5AQ29RF7 1337 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 SMIM31A0A1B0GVY4 71 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PQLC2LA1A4F0 135 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TMEM150BA6NC51 233 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SHISA7A6NL88 538 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PRMT5O14744 637 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 RAD1O60671 282 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TPST2O60704 377 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 HPRP00739 348 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 IFNA2P01563 188 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 CD74P04233 296 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PHBP35232 272 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 KIR2DL2P43627 348 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 ASPAP45381 313 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 NR0B1P51843 470 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 VSX2P58304 361 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 SNAP25P60880 206 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 RPL26P61254 145 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 NUTF2P61970 127 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 RPS15AP62244 130 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 MED21Q13503 144 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 C1orf61Q13536 156 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 NECTIN1Q15223 517 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 C2orf68Q2NKX9 166 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PRTGQ2VWP7 1150 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 LIN52Q52LA3 116 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 CARD16Q5EG05 197 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 C6orf141Q5SZD1 244 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 OR2G6Q5TZ20 316 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 MFSD12Q6NUT3 480 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 FIGNL1Q6PIW4 674 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 DHRS4L2Q6PKH6 230 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TMPRSS11AQ6ZMR5 421 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ACOT7LQ6ZUV0 252 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 IRF2BP2Q7Z5L9 587 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 CIR1Q86X95 450 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms