RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ERAL1O75616 437 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 TIPRLO75663 272 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 RGS11O94810 467 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CHRM4P08173 479 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CT45A8P0DMV1 189 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CT45A9P0DMV2 189 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ICAM2P13598 275 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 SRD5A1P18405 259 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PRPS1L1P21108 318 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ITGA3P26006 1051 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PIK3R1P27986 724 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PTPN6P29350 595 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 RYKP34925 604 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ASMTP46597 345 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CDK9P50750 372 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 CCL11P51671 97 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CRIP2P52943 208 aaPredicted RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 MLF1P58340 268 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 BRWD1-AS2P59051 145 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PLIN5Q00G26 463 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ZNF155Q12901 538 aaPredicted RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 MAD2L1Q13257 205 aaPredicted RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 MFAP5Q13361 173 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 RAPSNQ13702 412 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 LY6DQ14210 128 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 EXOSC7Q15024 291 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 HSP90B2PQ58FF3 399 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CT45A2Q5DJT8 189 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 SPANXN4Q5MJ08 99 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 FAM122CQ6P4D5 195 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 NPSR1Q6W5P4 371 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 Q6ZS92 163 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 SPATA19Q7Z5L4 167 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 LURAP1LQ8IV03 231 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 OR2L13Q8N349 312 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 LRRC25Q8N386 305 aaPredicted RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 CPSF7Q8N684 471 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 CLEC1AQ8NC01 280 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 LSM14AQ8ND56 463 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 OR8J2Q8NGG1 315 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 OR9I1Q8NGQ6 314 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 OR8K3Q8NH51 312 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 CEP70Q8NHQ1 597 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 GOT1L1Q8NHS2 421 aaPredicted RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 NUBPLQ8TB37 319 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 RNF138Q8WVD3 245 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 C10orf82Q8WW14 230 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 DYDC1Q8WWB3 177 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 FIG4Q92562 907 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 HAS2Q92819 552 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 DAZLQ92904 295 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 RIT1Q92963 219 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ADIPOR1Q96A54 375 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 TESCQ96BS2 214 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ELP4Q96EB1 424 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 THOC1Q96FV9 657 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 VMP1Q96GC9 406 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 VSTM2LQ96N03 204 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 DGAT2Q96PD7 388 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PELOQ9BRX2 385 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 LIN28AQ9H9Z2 209 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 WDR41Q9HAD4 459 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 SH2D2AQ9NP31 389 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 PNO1Q9NRX1 252 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 SLC6A13Q9NSD5 602 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ACSS1Q9NUB1 689 aaPredicted RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 FGFR1OP2Q9NVK5 253 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 GPR83Q9NYM4 423 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 RALYQ9UKM9 306 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 ERVK-19Q9WJR5 959 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 EIF3LQ9Y262 564 aaKnown RBP4.11□□□□□ -1.75
SMG1-206ENST00000562668 TP53TG5Q9Y2B4 290 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 ATRXP46100 2492 aa4.11□□□□□ -1.75
SMG1-206ENST00000562668 BOD1L1Q8NFC6 3051 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 TRBV11-1A0A0K0K1C0 115 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 OR6C76A6NM76 312 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 B4DXG7 233 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 C9JVG2 144 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 E9PBE3 544 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 TO15178 435 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 UBDO15205 165 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ZIC3O60481 467 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 KLHL41O60662 606 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 DIAPH2O60879 1101 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 SHOX2O60902 331 aaPredicted RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 ZFAND5O76080 213 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 SORBS2O94875 1100 aaKnown RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 NDUFB4O95168 129 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 WDPCPO95876 746 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 IFNA16P05015 189 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 IDO1P14902 403 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 TNNI3P19429 210 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 EFNA1P20827 205 aaPredicted RBP4.1□□□□□ -1.75
SMG1-206ENST00000562668 NT5EP21589 574 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 HPCAL1P37235 193 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 CDKN2CP42773 168 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 TNFSF10P50591 281 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 ATP4BP51164 291 aa4.1□□□□□ -1.75
SMG1-206ENST00000562668 NCBP2P52298 156 aaKnown RBP eCLIP4.1□□□□□ -1.75
SMG1-206ENST00000562668 NME5P56597 212 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms