RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 FAAHO00519 579 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 EIF1BO60739 113 aaKnown RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 SNUPNO95149 360 aaKnown RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 DBIP07108 87 aaKnown RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 KITP10721 976 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 CDH2P19022 906 aaPredicted RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 ACAA2P42765 397 aaKnown RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 MVDP53602 400 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 LGALS3BPQ08380 585 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 RAB35Q15286 201 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 OR7A5Q15622 319 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 TMEM249Q2WGJ8 235 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 CEP85LQ5SZL2 805 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 OTUD3Q5T2D3 398 aaPredicted RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 CLEC2AQ6UVW9 174 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 ZNF836Q6ZNA1 936 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 TRIML2Q8N7C3 387 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 ANKRD42Q8N9B4 389 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 C1orf162Q8NEQ5 155 aaPredicted RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 NANOS1Q8WY41 292 aaKnown RBP10.18□□□□□ -0.78
USP3-220ENST00000561381 MANSC1Q9H8J5 431 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 PARPBPQ9NWS1 579 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 DCTN4Q9UJW0 460 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 ARFGEF3Q5TH69 2177 aa10.18□□□□□ -0.78
USP3-220ENST00000561381 CUBNO60494 3623 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 CDHR4A6H8M9 788 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 RFXANKO14593 260 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 KLF11O14901 512 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 PRG2P13727 222 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 ETFAP13804 333 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 MPGP29372 298 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 P2RY4P51582 365 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
USP3-220ENST00000561381 GTDC1Q4AE62 458 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 HIKESHIQ53FT3 197 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 RPS26P11Q5JNZ5 115 aaPredicted RBP10.17□□□□□ -0.78
USP3-220ENST00000561381 C6orf52Q5T4I8 152 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 ZNF544Q6NX49 715 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 AAED1Q7RTV5 226 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 SPATA19Q7Z5L4 167 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 GPAT4Q86UL3 456 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 PEX5LQ8IYB4 626 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 KIRREL3Q8IZU9 778 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 DEPDC4Q8N2C3 294 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 CLIP4Q8N3C7 705 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 CADM2Q8N3J6 435 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 C17orf78Q8N4C9 275 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 OR9K2Q8NGE7 335 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 OR52P1PQ8NH57 321 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 TMEM45BQ96B21 275 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 AURKBQ96GD4 344 aaPredicted RBP10.17□□□□□ -0.78
USP3-220ENST00000561381 TNFRSF13CQ96RJ3 184 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 ZBTB18Q99592 522 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 ADPRHL2Q9NX46 363 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 MOKQ9UQ07 419 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 AMDHD2Q9Y303 409 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 CHST2Q9Y4C5 530 aa10.17□□□□□ -0.78
USP3-220ENST00000561381 DSPPQ9NZW4 1301 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 AQP7P3A6NL99 342 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 ELOA3DA6NLF2 546 aaPredicted RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 RNF212BA8MTL3 300 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 H7C417 338 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 HDAC3O15379 428 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 SNNO75324 88 aaPredicted RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 KRT75O95678 551 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 BCHEP06276 602 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 GPIP06744 558 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 UQCRBP14927 111 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 CXCR1P25024 350 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 CRATP43155 626 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 SELENOPP49908 381 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 ANXA11P50995 505 aaKnown RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 PRPS1P60891 318 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 TXNL4AP83876 142 aaKnown RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 TGFBR3Q03167 851 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 LOXL1Q08397 574 aaPredicted RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 GNA13Q14344 377 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 GSTA3Q16772 222 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 MST1LQ2TV78 715 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 ELOA3BQ3SY89 546 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 CHRFAM7AQ494W8 412 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 LIN52Q52LA3 116 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 HHATQ5VTY9 493 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 NXNQ6DKJ4 435 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 LINGO2Q7L985 606 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 ELOA3Q8NG57 546 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 MGARPQ8TDB4 240 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 C10orf105Q8TEF2 133 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 SLC38A5Q8WUX1 472 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 FAM168AQ92567 244 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 VPS33AQ96AX1 596 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 FKRPQ9H9S5 495 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 P2RX2Q9UBL9 471 aa10.16□□□□□ -0.78
USP3-220ENST00000561381 ZNF443Q9Y2A4 671 aaPredicted RBP10.16□□□□□ -0.78
USP3-220ENST00000561381 IGHV1-18A0A0C4DH31 117 aa10.15□□□□□ -0.78
USP3-220ENST00000561381 FRS3O43559 492 aa10.15□□□□□ -0.78
USP3-220ENST00000561381 SLC22A3O75751 556 aa10.15□□□□□ -0.78
USP3-220ENST00000561381 LGI1O95970 557 aa10.15□□□□□ -0.78
USP3-220ENST00000561381 TFPTP0C1Z6 253 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms