RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 TMEM229AB2RXF0 380 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 M0R3H8 397 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC22A2O15244 555 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 KRT33AO76009 404 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 RAF1P04049 648 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 THBDP07204 575 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 PTNP21246 168 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 CBLP22681 906 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 EDNRAP25101 427 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC16A1P53985 500 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 PCBP3P57721 371 aaKnown RBP11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 H3F3AP84243 136 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 FAPQ12884 760 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC17A1Q14916 467 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR1Q1Q15612 314 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 DUSP7Q16829 419 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 BEX5Q5H9J7 111 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 FBXW9Q5XUX1 488 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 AAED1Q7RTV5 226 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 NET1Q7Z628 596 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 P3H2Q8IVL5 708 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 C10orf53Q8N6V4 93 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 LSMEM1Q8N8F7 131 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 RP9Q8TA86 221 aaKnown RBP11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 RASSF5Q8WWW0 418 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 NINJ1Q92982 152 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 SLC38A4Q969I6 547 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 MUCL1Q96DR8 90 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 KTI12Q96EK9 354 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 MCHR1Q99705 422 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 RSPO3Q9BXY4 272 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR10A4Q9H209 315 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 EVA1AQ9H8M9 152 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 NGBQ9NPG2 151 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 ASB6Q9NWX5 421 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 FLVCR1Q9Y5Y0 555 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 FREM1Q5H8C1 2179 aa11.48□□□□□ -0.57
CTDSPL2-209ENST00000560620 CPSF4LA6NMK7 179 aaKnown RBP11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 FXYD1O00168 92 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 AIM2O14862 343 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 SIAH2O43255 324 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR2T1O43869 369 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 RAD51DO75771 328 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 CNOT4O95628 575 aaKnown RBP11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 C8BP07358 591 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 COX4I1P13073 169 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 GGT1P19440 569 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 IGHV1-2P23083 117 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 NR1H2P55055 460 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 TAB1Q15750 504 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 FAM91A1Q658Y4 838 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 PAMR1Q6UXH9 720 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR9K2Q8NGE7 335 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 MFSD8Q8NHS3 518 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 HSD17B8Q92506 261 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 PROX1Q92786 737 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 PLPPR2Q96GM1 343 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 SF3B5Q9BWJ5 86 aaKnown RBP11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
CTDSPL2-209ENST00000560620 HRNRQ86YZ3 2850 aaPredicted RBP11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 A0A1W2PPR1 153 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 CLOCKO15516 846 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 NPIPB7O75200 414 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 VAMP5O95183 116 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 LGI1O95970 557 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 IFNA14P01570 189 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 NQO1P15559 274 aaKnown RBP11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 CDH2P19022 906 aaPredicted RBP11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 CD247P20963 164 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 LSP1P33241 339 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 GYS2P54840 703 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 CDH12P55289 794 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 GNGT1P63211 74 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 EGR4Q05215 589 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 C1DQ13901 141 aaKnown RBP11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 LRRC23Q53EV4 343 aaPredicted RBP11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 ENTPD8Q5MY95 495 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 FAM69AQ5T7M9 428 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 ERICH5Q6P6B1 374 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 C5orf46Q6UWT4 87 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR2T12Q8NG77 320 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 GPR32P1Q8NGA4 272 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 OR6T1Q8NGN1 323 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 TAAR8Q969N4 342 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 TAMM41Q96BW9 452 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 EPYCQ99645 322 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 ARHGDIGQ99819 225 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 WFDC6Q9BQY6 131 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 USP22Q9UPT9 525 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 RASD1Q9Y272 281 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 SH3GLB1Q9Y371 365 aa11.46□□□□□ -0.57
CTDSPL2-209ENST00000560620 AKAP6Q13023 2319 aa11.46□□□□□ -0.58
CTDSPL2-209ENST00000560620 OTOGQ6ZRI0 2925 aa11.45□□□□□ -0.58
CTDSPL2-209ENST00000560620 TRAV36DV7A0A075B6V5 113 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms