RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 OR4K17Q8NGC6 315 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 OR52I1Q8NGK6 324 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 HIST1H2ACQ93077 130 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 LGALS12Q96DT0 336 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 C1GALT1C1Q96EU7 318 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 FER1L6-AS2Q96M78 137 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 ERMAPQ96PL5 475 aaPredicted RBP13.1□□□□□ -0.31
ZEB1-218ENST00000560196 BCL7BQ9BQE9 202 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 TAPBPLQ9BX59 468 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 GPN2Q9H9Y4 310 aaPredicted RBP13.1□□□□□ -0.31
ZEB1-218ENST00000560196 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
ZEB1-218ENST00000560196 IL17BQ9UHF5 180 aa13.1□□□□□ -0.31
ZEB1-218ENST00000560196 EXOGQ9Y2C4 368 aaKnown RBP13.1□□□□□ -0.31
ZEB1-218ENST00000560196 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
ZEB1-218ENST00000560196 EP300Q09472 2414 aaPredicted RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 ZC3H12DA2A288 527 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 CCDC160A6NGH7 325 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 MASP2O00187 686 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 WISP1O95388 367 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 CCL3P10147 92 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 LIPCP11150 499 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 CCNA2P20248 432 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 AQP2P41181 271 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 RPS5P46782 204 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 FOXF1Q12946 379 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 SGCBQ16585 318 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 DCAF10Q5QP82 559 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 SLC35F1Q5T1Q4 408 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 CCDC81Q6ZN84 652 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 MOSPD2Q8NHP6 518 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 MFSD8Q8NHS3 518 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 POC1BQ8TC44 478 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 ZBTB8AQ96BR9 441 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 ISOC1Q96CN7 298 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 DDIT4LQ96D03 193 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 RNFT2Q96EX2 444 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 JAM3Q9BX67 310 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 SERINC1Q9NRX5 453 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 TEKT2Q9UIF3 430 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 EXOSC1Q9Y3B2 195 aaKnown RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 CORINQ9Y5Q5 1042 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 IER3IP1Q9Y5U9 82 aa13.09□□□□□ -0.31
ZEB1-218ENST00000560196 SPIN1Q9Y657 262 aaPredicted RBP13.09□□□□□ -0.31
ZEB1-218ENST00000560196 TRIM64BA6NI03 449 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 FTCDNL1E5RQL4 147 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 LCKP06239 509 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ADRA2AP08913 450 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 SLC2A5P22732 501 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 NOS3P29474 1203 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 RPL4P36578 427 aaKnown RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 CLK1P49759 484 aaKnown RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 RPL18Q07020 188 aaKnown RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 RTP5Q14D33 572 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ALG10Q5BKT4 473 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ZNF468Q5VIY5 522 aaPredicted RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 PRAMEF20Q5VT98 475 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 C1QL3Q5VWW1 255 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 B3GNTL1Q67FW5 361 aaPredicted RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 PLBD1Q6P4A8 553 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 FAM122BQ7Z309 247 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 MARCH9Q86YJ5 346 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ANKRD13BQ86YJ7 626 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 SIRT6Q8N6T7 355 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 SLC37A3Q8NCC5 494 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 COG8Q96MW5 612 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 DDOQ99489 341 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 DLL3Q9NYJ7 618 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 MRPL39Q9NYK5 338 aaKnown RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 HAO2Q9NYQ3 351 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ABI3Q9P2A4 366 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 FBXL2Q9UKC9 423 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 VDAC3Q9Y277 283 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 ERGIC3Q9Y282 383 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 LSM2Q9Y333 95 aaKnown RBP13.08□□□□□ -0.32
ZEB1-218ENST00000560196 COMMD3-BMI1R4GMX3 469 aa13.08□□□□□ -0.32
ZEB1-218ENST00000560196 CCDC182A6NF36 153 aa13.07□□□□□ -0.32
ZEB1-218ENST00000560196 BLOC1S5-TXNDC5H3BN57 136 aa13.07□□□□□ -0.32
ZEB1-218ENST00000560196 NOL3O60936 208 aaKnown RBP13.07□□□□□ -0.32
ZEB1-218ENST00000560196 TRIM3O75382 744 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms