RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 OR5B2Q96R09 309 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 CLCC1Q96S66 551 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 ZNF670Q9BS34 389 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 RACGAP1Q9H0H5 632 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 JPT2Q9H910 190 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 IL1RAPQ9NPH3 570 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 CUTCQ9NTM9 273 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 MTCH1Q9NZJ7 389 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 ZNF107Q9UII5 783 aaPredicted RBP2.87□□□□□ -1.95
SPG11-218ENST00000559754 NUP50Q9UKX7 468 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 CENPJQ9HC77 1338 aaPredicted RBP2.87□□□□□ -1.95
SPG11-218ENST00000559754 SALL1Q9NSC2 1324 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 NEURL4Q96JN8 1562 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 USP47Q96K76 1375 aa2.87□□□□□ -1.95
SPG11-218ENST00000559754 ABCA7Q8IZY2 2146 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 KBTBD11-OT1A0A1B0GTJ5 212 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 OR6C74A6NCV1 312 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 SMCO2A6NFE2 343 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 H3BMQ9 156 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 WWP2O00308 870 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CXCL13O43927 109 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 MMP1P03956 469 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 SNRPCP09234 159 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 CT62P0C5K7 136 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 OR9G9P0C7N8 305 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 DUX4L4P0CJ87 422 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CD1DP15813 335 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 SDC1P18827 310 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 POLR2EP19388 210 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 EIF2S2P20042 333 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 COX5AP20674 150 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 IFNA8P32881 189 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 HLCSP50747 726 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 HNRNPA3P51991 378 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 GSTO1P78417 241 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 FKBP3Q00688 224 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 PPIL2Q13356 520 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 ILKQ13418 452 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 VGLL4Q14135 290 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 KIAA0141Q14154 515 aaPredicted RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 ZNF146Q15072 292 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 MRPL23Q16540 153 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 CYP51A1Q16850 503 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 ISXQ2M1V0 245 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 FAM120AOSQ5T036 256 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 METTL11BQ5VVY1 283 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 SASS6Q6UVJ0 657 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 BAIAP2L2Q6UXY1 529 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 LRRC31Q6UY01 552 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 SCARA5Q6ZMJ2 495 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 LRRC74BQ6ZQY2 392 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 COMTD1Q86VU5 262 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CARM1Q86X55 608 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CATSPER3Q86XQ3 398 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 VRK2Q86Y07 508 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CCDC71Q8IV32 467 aaPredicted RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 MMAAQ8IVH4 418 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 FAM58AQ8N1B3 248 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 TCAIMQ8N3R3 496 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 ZNRF1Q8ND25 227 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CATSPER1Q8NEC5 780 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 OR5T3Q8NGG3 340 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 FAM110BQ8TC76 370 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 PLEKHA8Q96JA3 519 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 ZNF641Q96N77 438 aaPredicted RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 PANX2Q96RD6 677 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 KCNA7Q96RP8 456 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 RIOK1Q9BRS2 568 aaKnown RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 TMEM175Q9BSA9 504 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 PPA2Q9H2U2 334 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 PPDPFQ9H3Y8 114 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 RNF41Q9H4P4 317 aaPredicted RBP2.86□□□□□ -1.95
SPG11-218ENST00000559754 ADGRL4Q9HBW9 690 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CCNB1IP1Q9NPC3 277 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 INPP5EQ9NRR6 644 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 DEPPQ9NTK1 212 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 ELOVL2Q9NXB9 296 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 EHFQ9NZC4 300 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 PTTG3PQ9NZH4 202 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 CLN8Q9UBY8 286 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 N6AMT1Q9Y5N5 214 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 USP16Q9Y5T5 823 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 STYXL1Q9Y6J8 313 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 MROH7-TTC4A0A0A0MT08 1334 aa2.86□□□□□ -1.95
SPG11-218ENST00000559754 KCNE1BA0A087WTH5 132 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 IGHV3-38A0A0C4DH36 116 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 CCT8L1PA6NM43 557 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 PP2D1A8MPX8 630 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 C12orf71A8MTZ7 269 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SERPINE3A8MV23 424 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 A8MXQ7 604 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 TEX46H3BTG2 121 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 BCKDKO14874 412 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 RGS16O15492 202 aaPredicted RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 PSTPIP1O43586 416 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 OR10H3O60404 316 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 CLPXO76031 633 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms