RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 RNF170Q96K19 258 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 DHRS1Q96LJ7 313 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 TSSK3Q96PN8 268 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 SERINC2Q96SA4 455 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 HBEGFQ99075 208 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 FEVQ99581 238 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 FAM173AQ9BQD7 235 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 CHCHD6Q9BRQ6 235 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 TMEM246Q9BRR3 403 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 INPP5KQ9BT40 448 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 CENPOQ9BU64 300 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 SORBS1Q9BX66 1292 aaKnown RBP5.34□□□□□ -1.55
USP3-212ENST00000559276 ASPNQ9BXN1 380 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 MS4A8Q9BY19 250 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 BHLHE41Q9C0J9 482 aaPredicted RBP5.34□□□□□ -1.55
USP3-212ENST00000559276 OR8D2Q9GZM6 311 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 TPT1P8Q9HAU6 139 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 SLC6A13Q9NSD5 602 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 ACOXLQ9NUZ1 547 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 DNAJC11Q9NVH1 559 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 HPF1Q9NWY4 346 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 ING3Q9NXR8 418 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 ZNF226Q9NYT6 803 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 GPRC5BQ9NZH0 403 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 VPS29Q9UBQ0 182 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 ATP6V1HQ9UI12 483 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 SSR3Q9UNL2 185 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 MGAT4BQ9UQ53 548 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 RBMX2Q9Y388 322 aaKnown RBP5.34□□□□□ -1.55
USP3-212ENST00000559276 RPL36Q9Y3U8 105 aaKnown RBP5.34□□□□□ -1.55
USP3-212ENST00000559276 CMAHPQ9Y471 501 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 ATG4BQ9Y4P1 393 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 V9GYH0 126 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 EXPH5Q8NEV8 1989 aa5.34□□□□□ -1.55
USP3-212ENST00000559276 DNHD1Q96M86 4753 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 DSPPQ9NZW4 1301 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 A0A1W2PS29 197 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CLDN4O14493 209 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SUSD5O60279 629 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SH3BGRLO75368 114 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 TNFRSF21O75509 655 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 PRKRAO75569 313 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 CTAG2O75638 210 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CYP7B1O75881 506 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 C1QBP02746 253 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 MYL9P24844 172 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 EPHA2P29317 976 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 RCVRNP35243 200 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CDKN2CP42773 168 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 RFX2P48378 723 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 IDH2P48735 452 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 SLC9A3P48764 834 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 PPP3R1P63098 170 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 PLIN5Q00G26 463 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SPIBQ01892 262 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 PLGLB1Q02325 96 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ACSM2AQ08AH3 577 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 QPRTQ15274 297 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SPHARQ15513 63 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 OCLNQ16625 522 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CPSF6Q16630 551 aaKnown RBP eCLIP5.33□□□□□ -1.56
USP3-212ENST00000559276 TSTQ16762 297 aaKnown RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 MPEG1Q2M385 716 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 TMEM44Q2T9K0 475 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 GLYR1Q49A26 553 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 PDZK1Q5T2W1 519 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 GCNT6Q5T4J0 391 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CPTPQ5TA50 214 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 NDUFAF5Q5TEU4 345 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 LCN1P1Q5VSP4 162 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 HACD4Q5VWC8 232 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ACSM2BQ68CK6 577 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 C18orf63Q68DL7 685 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 BICRALQ6AI39 1079 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SIGIRRQ6IA17 410 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 GRHL2Q6ISB3 625 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ZNF585AQ6P3V2 769 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 RTL4Q6ZR62 310 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ZNF621Q6ZSS3 439 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 IKBIPQ70UQ0 350 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 VTCN1Q7Z7D3 282 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 TMEM200AQ86VY9 491 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CCDC28AQ8IWP9 274 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 OR4N5Q8IXE1 308 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 LAS2Q8IYD9 372 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 KRT78Q8N1N4 520 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 C10orf111Q8N326 155 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 LRRC25Q8N386 305 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 FAM109AQ8N4B1 249 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 CELF2-AS1Q8N7Q2 184 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 ACOT4Q8N9L9 421 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 RELL2Q8NC24 303 aaPredicted RBP5.33□□□□□ -1.56
USP3-212ENST00000559276 DUSP18Q8NEJ0 188 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 TTLQ8NG68 377 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 OR8J1Q8NGP2 316 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 OR5M3Q8NGP4 307 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 OR14A16Q8NHC5 309 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 NUBPLQ8TB37 319 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 SPPL2AQ8TCT8 520 aa5.33□□□□□ -1.56
USP3-212ENST00000559276 DOK4Q8TEW6 326 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms