RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 EMP2P54851 167 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 STK38Q15208 465 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 FCN2Q15485 313 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 CDO1Q16878 200 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 GLIPR1L2Q4G1C9 344 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 WDR59Q6PJI9 974 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 TMPRSS11BQ86T26 416 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 FAM219AQ8IW50 185 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 NPEPL1Q8NDH3 523 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 OR4E2Q8NGC2 313 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 HEXDCQ8WVB3 486 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 RXFP2Q8WXD0 754 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 ST6GALNAC6Q969X2 333 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 SPDL1Q96EA4 605 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 DTNBP1Q96EV8 351 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 NPY6RQ99463 290 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 NRTNQ99748 197 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 RBM24Q9BX46 236 aaKnown RBP4.85□□□□□ -1.63
RTF1-204ENST00000558117 ASB8Q9H765 288 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 KIR3DX1Q9H7L2 352 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 PDFQ9HBH1 243 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 ZDHHC2Q9UIJ5 367 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 TRMT6Q9UJA5 497 aaKnown RBP4.85□□□□□ -1.63
RTF1-204ENST00000558117 WIF1Q9Y5W5 379 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 PLCE1Q9P212 2302 aa4.85□□□□□ -1.63
RTF1-204ENST00000558117 A0A1B0GVL5 298 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 GPR89AB7ZAQ6 455 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 ANGPT2O15123 496 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 KLRC4O43908 158 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 HSF2BPO75031 334 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 PRKRAO75569 313 aaKnown RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 DIRAS3O95661 229 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 TGFAP01135 160 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 SOD3P08294 240 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 GPR89BP0CG08 455 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 TPBGLP0DKB5 382 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 ZNF26P17031 533 aaPredicted RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 LONP1P36776 959 aaKnown RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 MDH1P40925 334 aaKnown RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 WNT5AP41221 380 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 SULT1E1P49888 294 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 STC1P52823 247 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 CUL2Q13617 745 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 DPYSQ14117 519 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 TAF13Q15543 124 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 CAMK4Q16566 473 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 ZFP69Q49AA0 526 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 CCDC183Q5T5S1 534 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 HENMT1Q5T8I9 393 aaKnown RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 LRRC66Q68CR7 880 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 TMEM205Q6UW68 189 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 ZBTB49Q6ZSB9 765 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 CCDC65Q8IXS2 484 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 KDM8Q8N371 416 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 LINC00301Q8NCQ3 95 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 DDHD1Q8NEL9 900 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 MRAPQ8TCY5 172 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 RNASE8Q8TDE3 154 aaKnown RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 NT5C3BQ969T7 300 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 NTNG2Q96CW9 530 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 CAPZA3Q96KX2 299 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 SAMD8Q96LT4 415 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 SMIM14Q96QK8 99 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 SLITRK2Q9H156 845 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 WNT5BQ9H1J7 359 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.84□□□□□ -1.63
RTF1-204ENST00000558117 KLHL28Q9NXS3 571 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 DAPK2Q9UIK4 370 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 KLHL21Q9UJP4 597 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 CFAP45Q9UL16 551 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 PSMD13Q9UNM6 376 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 KLF13Q9Y2Y9 288 aaPredicted RBP4.84□□□□□ -1.63
RTF1-204ENST00000558117 PPIL1Q9Y3C6 166 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 PYGO1Q9Y3Y4 419 aa4.84□□□□□ -1.63
RTF1-204ENST00000558117 EML6Q6ZMW3 1958 aa4.84□□□□□ -1.64
RTF1-204ENST00000558117 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 A0A1W2PN81 502 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 A0A1W2PQ67 120 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 EPPINO95925 133 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 SLC25A16P16260 332 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 CHRNA7P36544 502 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 ASMTP46597 345 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 UBE2HP62256 183 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 PPIAP62937 165 aaKnown RBP4.83□□□□□ -1.64
RTF1-204ENST00000558117 SIX1Q15475 284 aaPredicted RBP4.83□□□□□ -1.64
RTF1-204ENST00000558117 WLSQ5T9L3 541 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 RWDD4Q6NW29 188 aaKnown RBP4.83□□□□□ -1.64
RTF1-204ENST00000558117 SERPINA12Q8IW75 414 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 OR11H4Q8NGC9 324 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 HPSE2Q8WWQ2 592 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 GIMAP5Q96F15 307 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 EPSTI1Q96J88 318 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 MUS81Q96NY9 551 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 ACPTQ9BZG2 426 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 THAP2Q9H0W7 228 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 KCNK13Q9HB14 408 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 CUTCQ9NTM9 273 aa4.83□□□□□ -1.64
RTF1-204ENST00000558117 IMP3Q9NV31 184 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms