RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 EPYCQ99645 322 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 SLC19A3Q9BZV2 496 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 YY1AP1Q9H869 796 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 TIGARQ9NQ88 270 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 FLNCQ14315 2725 aa13.67□□□□□ -0.22
NEDD1-213ENST00000557644 SH3PXD2BA1X283 911 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 SMAD9O15198 467 aaKnown RBP13.66□□□□□ -0.22
NEDD1-213ENST00000557644 KRT36O76013 467 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 TOXO94900 526 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 HMGA2P52926 109 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 SMIM11AP58511 58 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF74Q16587 644 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 NSUN5P2Q63ZY6 315 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 C5orf46Q6UWT4 87 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 MBOAT2Q6ZWT7 520 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 TMEM179BQ7Z7N9 219 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 TMEM99Q8N816 258 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 OR4K5Q8NGD3 323 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 ABHD3Q8WU67 409 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 LRTOMTQ8WZ04 291 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 TTYH2Q9BSA4 534 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 TAPBPLQ9BX59 468 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 REEP1Q9H902 201 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 PAQR5Q9NXK6 330 aaPredicted RBP13.66□□□□□ -0.22
NEDD1-213ENST00000557644 CCL21O00585 134 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 GNGT2O14610 69 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 CLOCKO15516 846 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 OR2T1O43869 369 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 IFI30P13284 250 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 HOXB6P17509 224 aaKnown RBP13.66□□□□□ -0.22
NEDD1-213ENST00000557644 MAKP20794 623 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 PTGER4P35408 488 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 SLC35A1P78382 337 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 H3F3AP84243 136 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 PMPCAQ10713 525 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 MYO7BQ6PIF6 2116 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 SLC46A3Q7Z3Q1 461 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 AMIGO2Q86SJ2 522 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 KLHL4Q9C0H6 718 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 CALHM2Q9HA72 323 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 MCTS1Q9ULC4 181 aaKnown RBP13.66□□□□□ -0.22
NEDD1-213ENST00000557644 MEMO1Q9Y316 297 aa13.66□□□□□ -0.22
NEDD1-213ENST00000557644 CD8B2A6NJW9 211 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 M0R082 166 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 LRRTM2O43300 516 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 SYNGR4O95473 234 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 GLI4P10075 376 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 GRPRP30550 384 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 GPR4P46093 362 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 AGFG1P52594 562 aaKnown RBP13.65□□□□□ -0.22
NEDD1-213ENST00000557644 RRM2BQ7LG56 351 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 GCNT2Q8N0V5 402 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 OR9Q2Q8NGE9 314 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF417Q8TAU3 575 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 BPIFA2Q96DR5 249 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF587Q96SQ5 575 aaPredicted RBP13.65□□□□□ -0.22
NEDD1-213ENST00000557644 PRRG4Q9BZD6 226 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 KLHL13Q9P2N7 655 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 DNAJB9Q9UBS3 223 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 E9PLN8 166 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
NEDD1-213ENST00000557644 P2RY4P51582 365 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 FCRLAQ7L513 359 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 P4HA3Q7Z4N8 544 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 RNF113BQ8IZP6 322 aaKnown RBP13.65□□□□□ -0.22
NEDD1-213ENST00000557644 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 KDM8Q8N371 416 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 SGTBQ96EQ0 304 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 FAM46AQ96IP4 442 aaKnown RBP13.65□□□□□ -0.22
NEDD1-213ENST00000557644 DMRTA2Q96SC8 542 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 GPA33Q99795 319 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 VKORC1Q9BQB6 163 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 NANSQ9NR45 359 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
NEDD1-213ENST00000557644 TMCC3Q9ULS5 477 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF175Q9Y473 711 aa13.65□□□□□ -0.22
NEDD1-213ENST00000557644 UBR5O95071 2799 aaPredicted RBP13.65□□□□□ -0.23
NEDD1-213ENST00000557644 CDC42EP2O14613 210 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 OR10H3O60404 316 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 GTF2E2P29084 291 aaKnown RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 OMPP47874 163 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 CTBP2P56545 445 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 NUP107P57740 925 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 PRKCDQ05655 676 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 ATP6AP1Q15904 470 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 OTUD3Q5T2D3 398 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-213ENST00000557644 ZFP1Q6P2D0 407 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 PAQR6Q6TCH4 344 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 ZER1Q7Z7L7 766 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 NAXEQ8NCW5 288 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 RNF128Q8TEB7 428 aa13.64□□□□□ -0.23
NEDD1-213ENST00000557644 WNT2BQ93097 391 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms