RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 TRNT1Q96Q11 434 aaKnown RBP15.44■□□□□ 0.06
SDR39U1-219ENST00000556523 PIMREGQ9BSJ6 248 aa15.44■□□□□ 0.06
SDR39U1-219ENST00000556523 AGAP5A6NIR3 686 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 SLCO1B7G3V0H7 640 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 HMGN4O00479 90 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 KRT33AO76009 404 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 GPIP06744 558 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 IL7RP16871 459 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 LBPP18428 481 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 CDH2P19022 906 aaPredicted RBP15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 SLC1A3P43003 542 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 SNRPD2P62316 118 aaKnown RBP15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 LSM11P83369 360 aaKnown RBP eCLIP15.43■□□□□ 0.064e-7■□□□□ 9
SDR39U1-219ENST00000556523 GGTLC2Q14390 218 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 FAM174BQ3ZCQ3 159 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 AAED1Q7RTV5 226 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 RNF130Q86XS8 419 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 ZNF440Q8IYI8 595 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 ANKFN1Q8N957 763 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 TMEM45BQ96B21 275 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 CCDC115Q96NT0 180 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 SLC38A1Q9H2H9 487 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 KCNS2Q9ULS6 477 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 MOKQ9UQ07 419 aa15.43■□□□□ 0.06
SDR39U1-219ENST00000556523 YLPM1P49750 1951 aaKnown RBP15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.42■□□□□ 0.063e-22■□□□□ 9.6
SDR39U1-219ENST00000556523 CFAP73A6NFT4 308 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 FAAHO00519 579 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 LMX1BO60663 402 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 LY6HO94772 140 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 CHRM4P08173 479 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 NR2F1P10589 423 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 SRD5A1P18405 259 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 EPS8Q12929 822 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 OR7A5Q15622 319 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 SYPL1Q16563 259 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 CARTPTQ16568 116 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 MRPL2Q5T653 305 aaKnown RBP15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 AP1ARQ63HQ0 302 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 FAM166AQ6J272 317 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 LRRC74BQ6ZQY2 392 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 PEX5LQ8IYB4 626 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 OR9K2Q8NGE7 335 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 PANX1Q96RD7 426 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 TAPBPLQ9BX59 468 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 CHODLQ9H9P2 273 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 OBP2BQ9NPH6 170 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 PNPOQ9NVS9 261 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 BTNL2Q9UIR0 455 aa15.42■□□□□ 0.06
SDR39U1-219ENST00000556523 ARFGEF3Q5TH69 2177 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 ZC3H12DA2A288 527 aaKnown RBP15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 PRAMEF27A3QJZ7 478 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 CCDC154A6NI56 674 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 NDUFS8O00217 210 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 F12P00748 615 aaPredicted RBP15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 DBIP07108 87 aaKnown RBP15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 HNF1AP20823 631 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 CXCR1P25024 350 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 UBE2NP61088 152 aaKnown RBP15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 CEACAM7Q14002 265 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 SLC46A3Q7Z3Q1 461 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 GPAT4Q86UL3 456 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 LRRC34Q8IZ02 419 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 SF3B5Q9BWJ5 86 aaKnown RBP15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 NUF2Q9BZD4 464 aa15.41■□□□□ 0.06
SDR39U1-219ENST00000556523 LIPT2A6NK58 231 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 AQP7P3A6NL99 342 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 ZNF587BE7ETH6 402 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 HDAC3O15379 428 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 AKR7A3O95154 331 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 APEHP13798 732 aaKnown RBP15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 RPS4Y1P22090 263 aaKnown RBP15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 NME5P56597 212 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 LRRC74AQ0VAA2 488 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 GSTA3Q16772 222 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 HIKESHIQ53FT3 197 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 TMEM99Q8N816 258 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 PNPT1Q8TCS8 783 aaKnown RBP15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 C3orf49Q96BT1 292 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 SORCS2Q96PQ0 1159 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 SLC38A2Q96QD8 506 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 ZBTB18Q99592 522 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 PIF1Q9H611 641 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 MTHFD2LQ9H903 347 aaPredicted RBP15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 MEAF6Q9HAF1 191 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 CACYBPQ9HB71 228 aaKnown RBP15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 MYOZ1Q9NP98 299 aaPredicted RBP15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 TMEM45AQ9NWC5 275 aa15.4■□□□□ 0.06
SDR39U1-219ENST00000556523 MALRD1Q5VYJ5 2156 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 LOC100289279A0A1B0GTE1 492 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 TRPC5OSA6NMA1 111 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 CRYAAP02489 173 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 PAX7P23759 505 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 IGFBP5P24593 272 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 NR4A2P43354 598 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 COPZ1P61923 177 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 SWI5Q1ZZU3 235 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 TBRG1Q3YBR2 411 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 IQCCQ4KMZ1 466 aa15.39■□□□□ 0.05
SDR39U1-219ENST00000556523 LIN52Q52LA3 116 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms