RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 AAED1Q7RTV5 226 aa16.47■□□□□ 0.23
CDKN3-209ENST00000556102 ZIC4Q8N9L1 334 aa16.47■□□□□ 0.23
CDKN3-209ENST00000556102 GLB1L3Q8NCI6 653 aaPredicted RBP16.47■□□□□ 0.23
CDKN3-209ENST00000556102 FAM168AQ92567 244 aa16.47■□□□□ 0.23
CDKN3-209ENST00000556102 ZNF385AQ96PM9 386 aaKnown RBP16.47■□□□□ 0.23
CDKN3-209ENST00000556102 RLIMQ9NVW2 624 aa16.47■□□□□ 0.23
CDKN3-209ENST00000556102 CALML5Q9NZT1 146 aa16.47■□□□□ 0.23
CDKN3-209ENST00000556102 P2RX2Q9UBL9 471 aa16.47■□□□□ 0.23
CDKN3-209ENST00000556102 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDKN3-209ENST00000556102 V9GYY5 206 aaPredicted RBP16.47■□□□□ 0.23
CDKN3-209ENST00000556102 DSPPQ9NZW4 1301 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 RNF212BA8MTL3 300 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 RFXANKO14593 260 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 CSF3P09919 207 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 GKN3PP0CG01 181 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 EPHA3P29320 983 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 EFNA4P52798 201 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 CEP85LQ5SZL2 805 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 WBP2NLQ6ICG8 309 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 ZNF836Q6ZNA1 936 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 ABHD12BQ7Z5M8 362 aaPredicted RBP16.46■□□□□ 0.23
CDKN3-209ENST00000556102 VRK2Q86Y07 508 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 OR52P1PQ8NH57 321 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 C10orf105Q8TEF2 133 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 BOD1Q96IK1 185 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 PAIP2Q9BPZ3 127 aaKnown RBP16.46■□□□□ 0.23
CDKN3-209ENST00000556102 TAPBPLQ9BX59 468 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 WDR55Q9H6Y2 383 aaPredicted RBP16.46■□□□□ 0.23
CDKN3-209ENST00000556102 PMF1-BGLAPU3KQ54 211 aa16.46■□□□□ 0.23
CDKN3-209ENST00000556102 TRPC5OSA6NMA1 111 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 ATP6V1G2-DDX39BF2Z307 99 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 HDAC3O15379 428 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 ACAA2P42765 397 aaKnown RBP16.45■□□□□ 0.22
CDKN3-209ENST00000556102 MVDP53602 400 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 COPZ1P61923 177 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 HHATQ5VTY9 493 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 GPAT4Q86UL3 456 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 CADM2Q8N3J6 435 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 PROX1Q92786 737 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 MANSC1Q9H8J5 431 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 OBP2BQ9NPH6 170 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 SLC6A13Q9NSD5 602 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 CDC42EP3Q9UKI2 254 aa16.45■□□□□ 0.22
CDKN3-209ENST00000556102 A8MVM7 634 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 FRS3O43559 492 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 VAMP5O95183 116 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 IL6P05231 212 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 BCHEP06276 602 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 FAM157CP0CG43 387 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 ETFAP13804 333 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 CDH2P19022 906 aaPredicted RBP16.44■□□□□ 0.22
CDKN3-209ENST00000556102 CRISP3P54108 245 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 BNIP2Q12982 314 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 ZSWIM7Q19AV6 140 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 PDCD4Q53EL6 469 aaKnown RBP16.44■□□□□ 0.22
CDKN3-209ENST00000556102 HIKESHIQ53FT3 197 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 RNF220Q5VTB9 566 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM225Q6GV28 225 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 CROCCP2Q86T23 111 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 ANKRD42Q8N9B4 389 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 NANOS1Q8WY41 292 aaKnown RBP16.44■□□□□ 0.22
CDKN3-209ENST00000556102 AURKBQ96GD4 344 aaPredicted RBP16.44■□□□□ 0.22
CDKN3-209ENST00000556102 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 THAP1Q9NVV9 213 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM160Q9NX00 188 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 ADPRHL2Q9NX46 363 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 MOKQ9UQ07 419 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 ZNF443Q9Y2A4 671 aaPredicted RBP16.44■□□□□ 0.22
CDKN3-209ENST00000556102 MALRD1Q5VYJ5 2156 aa16.44■□□□□ 0.22
CDKN3-209ENST00000556102 A0A096LPI6 279 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 SNNO75324 88 aaPredicted RBP16.43■□□□□ 0.22
CDKN3-209ENST00000556102 KRT33AO76009 404 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 TFPTP0C1Z6 253 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 ZCCHC18P0CG32 403 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 IDO1P14902 403 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 CRATP43155 626 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 P2RY4P51582 365 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 DSTNP60981 165 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 LARS2Q15031 903 aaKnown RBP16.43■□□□□ 0.22
CDKN3-209ENST00000556102 SWI5Q1ZZU3 235 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 PHC2Q8IXK0 858 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 SLC38A5Q8WUX1 472 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 FBXO17Q96EF6 278 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 KCNK17Q96T54 332 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 TPT1P8Q9HAU6 139 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM45AQ9NWC5 275 aa16.43■□□□□ 0.22
CDKN3-209ENST00000556102 OR6C65A6NJZ3 312 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 ZNF587BE7ETH6 402 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 SLCO1B7G3V0H7 640 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 KLF11O14901 512 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 SLC22A3O75751 556 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 ANP32DO95626 131 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 F12P00748 615 aaPredicted RBP16.42■□□□□ 0.22
CDKN3-209ENST00000556102 KITP10721 976 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 PRG2P13727 222 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 NCF2P19878 526 aaPredicted RBP16.42■□□□□ 0.22
CDKN3-209ENST00000556102 USF1P22415 310 aaPredicted RBP16.42■□□□□ 0.22
CDKN3-209ENST00000556102 PAX7P23759 505 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 SELENOPP49908 381 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 WDR4P57081 412 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms