RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TNFRSF13CQ96RJ3 184 aa9.69□□□□□ -0.86
TDP1-211ENST00000555178 ANKRD60Q9BZ19 345 aa9.69□□□□□ -0.86
TDP1-211ENST00000555178 C12orf10Q9HB07 376 aa9.69□□□□□ -0.86
TDP1-211ENST00000555178 MCCC2Q9HCC0 563 aa9.69□□□□□ -0.86
TDP1-211ENST00000555178 SPRR3Q9UBC9 169 aa9.69□□□□□ -0.86
TDP1-211ENST00000555178 EIF4E1BA6NMX2 242 aaKnown RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 A8MVM7 634 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 FAM47E-STBD1D6RA91 191 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 HPNP05981 417 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 APOBEC1P41238 236 aaKnown RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 MLLT10P55197 1068 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 GFRA1P56159 465 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 HYAL4Q2M3T9 481 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 RFX4Q33E94 735 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 WLSQ5T9L3 541 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 C1orf140Q5VVS0 124 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 CD300LDQ6UXZ3 194 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 RASSF6Q6ZTQ3 369 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 OAFQ86UD1 273 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 SIAH3Q8IW03 269 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 GTPBP8Q8N3Z3 284 aaPredicted RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 OR4Q3Q8NH05 313 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 ZBTB8AQ96BR9 441 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 OR2B2Q9GZK3 357 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 OR52D1Q9H346 318 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 NDRG4Q9ULP0 352 aaKnown RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 SIGLEC7Q9Y286 467 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 PCDHGB6Q9Y5F9 930 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 ZAR1LA6NP61 321 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 NPIPA5E9PKD4 350 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 SLC16A6O15403 523 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 DENRO43583 198 aaKnown RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 OR7A10O76100 309 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 BGLAPP02818 100 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 TFPIP10646 304 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 IMPDH2P12268 514 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 HTR3AP46098 478 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 CTU2Q2VPK5 515 aaKnown RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 SYT14P1Q58G82 188 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 ACSM5Q6NUN0 579 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 C3orf33Q6P1S2 294 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 FGD2Q7Z6J4 655 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 CDK20Q8IZL9 346 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 ZNF555Q8NEP9 628 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 TM9SF4Q92544 642 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 SLC19A3Q9BZV2 496 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 ZDHHC11Q9H8X9 412 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 KRCC1Q9NPI7 259 aaPredicted RBP9.68□□□□□ -0.86
TDP1-211ENST00000555178 NPIPA1Q9UND3 350 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 TMEM5Q9Y2B1 443 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 GMPPBQ9Y5P6 360 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 CHD6Q8TD26 2715 aa9.68□□□□□ -0.86
TDP1-211ENST00000555178 FREM1Q5H8C1 2179 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 TRAV36DV7A0A075B6V5 113 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 A0A087WZY1 265 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 A0A0J9YW62 118 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 ZNF814B7Z6K7 855 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 H0YAE9 185 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 CDH2P19022 906 aaPredicted RBP9.67□□□□□ -0.86
TDP1-211ENST00000555178 GSTM3P21266 225 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 SLC9A3P48764 834 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 MYBPHQ13203 477 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 OR7A5Q15622 319 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 TMEM176BQ3YBM2 270 aaPredicted RBP9.67□□□□□ -0.86
TDP1-211ENST00000555178 GLYR1Q49A26 553 aaPredicted RBP9.67□□□□□ -0.86
TDP1-211ENST00000555178 ZNF691Q5VV52 312 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 GGNQ86UU5 652 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 UBQLNLQ8IYU4 475 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 FAM81AQ8TBF8 368 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 HRASLS5Q96KN8 279 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 BBC3Q96PG8 261 aaPredicted RBP9.67□□□□□ -0.86
TDP1-211ENST00000555178 PITX2Q99697 317 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 NANSQ9NR45 359 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 RASSF1Q9NS23 344 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 TBC1D23Q9NUY8 699 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 LRCH1Q9Y2L9 728 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 CDH10Q9Y6N8 788 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 MCIDASD6RGH6 385 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 FTCDNL1E5RQL4 147 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 BLOC1S5-TXNDC5H3BN57 136 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 RAMP1O60894 148 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 PTP4A3O75365 173 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 SLC2A10O95528 541 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 ASAH2BP0C7U1 165 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 ZNF24P17028 368 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 BMP7P18075 431 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 MYF6P23409 242 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 ELK4P28324 431 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 AQP2P41181 271 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 EIF1P41567 113 aaKnown RBP9.67□□□□□ -0.86
TDP1-211ENST00000555178 ESRRGP62508 458 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 COX10Q12887 443 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 SELENBP1Q13228 472 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 MED21Q13503 144 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 GINS1Q14691 196 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 PDK3Q15120 406 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 FAM109AQ8N4B1 249 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms