RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 KHKP50053 298 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 WNT4P56705 351 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KLF3P57682 345 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SNRPEP62304 92 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CDKL1Q00532 357 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 IRF8Q02556 426 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ELAVL2Q12926 359 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 BAATQ14032 418 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RCAN2Q14206 197 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CSHL1Q14406 222 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KRT33BQ14525 404 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SLC29A2Q14542 456 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DAZAP2Q15038 168 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 MAPK11Q15759 364 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TATDN3Q17R31 274 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DCST1Q5T197 706 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CERCAMQ5T4B2 595 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PRAMEF5Q5TYX0 476 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PRAMEF6Q5VXH4 476 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 IZUMO3Q5VZ72 239 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RUSC1-AS1Q66K80 236 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DHRS7BQ6IAN0 325 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ACAD10Q6JQN1 1059 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF773Q6PK81 442 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RBMS3Q6XE24 437 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 C17orf107Q6ZR85 190 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 QSOX2Q6ZRP7 698 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 LINC00696Q6ZRV3 163 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KCTD8Q6ZWB6 473 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SLC35D2Q76EJ3 337 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 LRRC70Q7Z2Q7 622 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PID1Q7Z2X4 250 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RANBP3LQ86VV4 465 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 AMZ2Q86W34 360 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CATSPERDQ86XM0 798 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PUSL1Q8N0Z8 303 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KDM8Q8N371 416 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 GALNT16Q8N428 558 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 C17orf78Q8N4C9 275 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 FAM86B1Q8N7N1 296 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 YIPF7Q8N8F6 280 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 HSD17B11Q8NBQ5 300 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 AQP11Q8NBQ7 271 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KIAA0895Q8NCT3 520 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 OR2M7Q8NG81 312 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 OR8J3Q8NGG0 315 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 OR52N4Q8NGI2 321 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 OR8J1Q8NGP2 316 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 OR5J2Q8NH18 312 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PPP1R35Q8TAP8 253 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM174Q8WUU8 243 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PIH1D2Q8WWB5 315 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CDS1Q92903 461 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SLC38A4Q969I6 547 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SLAMF9Q96A28 289 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CREB3L1Q96BA8 519 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NXNL1Q96CM4 212 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 FAF2Q96CS3 445 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CMTM5Q96DZ9 223 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 MVB12AQ96EY5 273 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SLC22A12Q96S37 553 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PSMB7Q99436 277 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CITED1Q99966 193 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KLHDC3Q9BQ90 382 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 AIF1LQ9BQI0 150 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 C7orf50Q9BRJ6 194 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DPH7Q9BTV6 452 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NDUFAF3Q9BU61 184 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SORBS1Q9BX66 1292 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PRRG3Q9BZD7 231 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NKX6-2Q9C056 277 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ELOVL4Q9GZR5 314 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SRRQ9GZT4 340 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 COMMD4Q9H0A8 199 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DSN1Q9H410 356 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RNF122Q9H9V4 155 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RANGRFQ9HD47 186 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ABCB9Q9NP78 766 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 POLE4Q9NR33 117 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ABCB8Q9NUT2 735 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 HIF1ANQ9NWT6 349 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 MIOSQ9NXC5 875 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DHCR7Q9UBM7 475 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 OR12D3Q9UGF7 316 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CHRNA9Q9UGM1 479 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SIX4Q9UIU6 781 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 RIMS3Q9UJD0 308 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 LEF1Q9UJU2 399 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SERTAD3Q9UJW9 196 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 DKKL1Q9UK85 242 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TRAPPC4Q9Y296 219 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PRG3Q9Y2Y8 225 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 FBXO7Q9Y3I1 522 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM184BQ9Y519 407 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 U3KQV3 271 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 COL4A2P08572 1712 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ANKRD17O75179 2603 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms