RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 DNAJC13O75165 2243 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 SVILO95425 2214 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 IGHV3-15A0A0B4J1V0 119 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 HTR3EA5X5Y0 456 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 ENO4A6NNW6 628 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 LRRN3E7EW58 273 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 E9PLN8 166 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 SMAD9O15198 467 aaKnown RBP10.95□□□□□ -0.66
SHMT2-209ENST00000553949 CLOCKO15516 846 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 EIF1BO60739 113 aaKnown RBP10.95□□□□□ -0.66
SHMT2-209ENST00000553949 FZD7O75084 574 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 DEAF1O75398 565 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-209ENST00000553949 TGM6O95932 706 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 CH25HO95992 272 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 MT-ATP6P00846 226 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 LDLRP01130 860 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 IFI30P13284 250 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 KLK2P20151 261 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 CBLP22681 906 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 FASP25445 335 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 GTF2E2P29084 291 aaKnown RBP10.95□□□□□ -0.66
SHMT2-209ENST00000553949 GRPRP30550 384 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 CTBP2P56545 445 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 H3F3AP84243 136 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 PRKCDQ05655 676 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 PPP1R8Q12972 351 aaKnown RBP10.95□□□□□ -0.66
SHMT2-209ENST00000553949 GK3PQ14409 553 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 ATP6AP1Q15904 470 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 PAQR6Q6TCH4 344 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 B3GNT6Q6ZMB0 384 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 SEM1Q6ZVN7 128 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 MEX3DQ86XN8 651 aaKnown RBP10.95□□□□□ -0.66
SHMT2-209ENST00000553949 RPRMLQ8N4K4 120 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 OR4K5Q8NGD3 323 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 PRR7Q8TB68 274 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 ROBO4Q8WZ75 1007 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 WNT2BQ93097 391 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 BPIFA2Q96DR5 249 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 ZHX1-C8orf76Q96EF9 292 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 SGTBQ96EQ0 304 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 VKORC1Q9BQB6 163 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 PRRG4Q9BZD6 226 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 NTN4Q9HB63 628 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 MEMO1Q9Y316 297 aa10.95□□□□□ -0.66
SHMT2-209ENST00000553949 ZNF462Q96JM2 2506 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 ZNF814B7Z6K7 855 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 OR10H3O60404 316 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 E2F6O75461 281 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 OR7A10O76100 309 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 AQP8O94778 261 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 AKR7A3O95154 331 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 GLI4P10075 376 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 FCGR2AP12318 317 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 FUT1P19526 365 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 DNAJA1P31689 397 aaKnown RBP10.94□□□□□ -0.66
SHMT2-209ENST00000553949 OMPP47874 163 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 IST1P53990 364 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 MFSD13AQ14CX5 517 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 LAPTM4AQ15012 233 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 FCRLAQ7L513 359 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 MAMDC2Q7Z304 686 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-209ENST00000553949 SLC46A3Q7Z3Q1 461 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 P4HA3Q7Z4N8 544 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 MARVELD2Q8N4S9 558 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 LRRC17Q8N6Y2 441 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 TMEM99Q8N816 258 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 SCAIQ8N9R8 606 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 C9orf106Q8NAJ2 232 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 PIGXQ8TBF5 258 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 RNF128Q8TEB7 428 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 LRTOMTQ8WZ04 291 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 STMN2Q93045 179 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 TTYH2Q9BSA4 534 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 NAA11Q9BSU3 229 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-209ENST00000553949 ASPNQ9BXN1 380 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 FKRPQ9H9S5 495 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 RNF122Q9H9V4 155 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 KRCC1Q9NPI7 259 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-209ENST00000553949 NANSQ9NR45 359 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 SEC14L4Q9UDX3 406 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 ZNF229Q9UJW7 825 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 TMEM5Q9Y2B1 443 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 CORINQ9Y5Q5 1042 aa10.94□□□□□ -0.66
SHMT2-209ENST00000553949 A0A1B0GUH1 482 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 MBD3L4A6NDZ8 208 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-209ENST00000553949 MBD3L3A6NE82 208 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-209ENST00000553949 MBD3L5A6NJ08 208 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-209ENST00000553949 AQP7P3A6NL99 342 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 EFCAB9A8MZ26 197 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 PYCARD-AS1I3L0S3 204 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 M0R082 166 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 CCL21O00585 134 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 CYTIPO60759 359 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 TOXO94900 526 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 CCNB2O95067 398 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 ASAH2BP0C7U1 165 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 PLA2G2AP14555 144 aa10.93□□□□□ -0.66
SHMT2-209ENST00000553949 MAKP20794 623 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms