RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PSG2P11465 335 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ANXA3P12429 323 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 DRD5P21918 477 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 RFC2P35250 354 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 MRPS6P82932 125 aaKnown RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 BDH1Q02338 343 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 CHIT1Q13231 466 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 MAPK6Q16659 721 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 TFDP3Q5H9I0 405 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 TMEM31Q5JXX7 168 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 RABGAP1LQ5R372 815 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 SPATA46Q5T0L3 261 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 AGBL2Q5U5Z8 902 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ATF7IP2Q5U623 682 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 FKBP1CQ5VVH2 108 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ASPHD2Q6ICH7 369 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 CBLN3Q6UW01 205 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 UTS2BQ765I0 119 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 TAS2R42Q7RTR8 314 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 DPY19L4Q7Z388 723 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 NET1Q7Z628 596 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 TMEM179BQ7Z7N9 219 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 TMEM17Q86X19 198 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 MCOLN2Q8IZK6 566 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ARFGAP2Q8N6H7 521 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 STXBP6Q8NFX7 210 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 FAM151AQ8WW52 585 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 MYLPFQ96A32 169 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 UPRTQ96BW1 309 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 TUBGCP3Q96CW5 907 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 SLC25A38Q96DW6 304 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 RPRD1AQ96P16 312 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ZSCAN5AQ9BUG6 496 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 VPS37BQ9H9H4 285 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 NANOGQ9H9S0 305 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 EXOSC3Q9NQT5 275 aaKnown RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 DCAF13Q9NV06 445 aaKnown RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 RBM28Q9NW13 759 aaKnown RBP2.46□□□□□ -2.02
SCFD1-210ENST00000553693 SPACA6W5XKT8 324 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 XIRP2A4UGR9 3374 aa2.46□□□□□ -2.02
SCFD1-210ENST00000553693 ZMYM6O95789 1325 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 PLXNB2O15031 1838 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 LTBP2Q14767 1821 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 FAM47DPA6NHR8 397 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 LRRC30A6NM36 301 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 PPIAL4DF5H284 164 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 PRRG1O14668 218 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 STX11O75558 287 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 LRATO95237 230 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 ECDO95905 644 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 IGSF6O95976 241 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 MBD3O95983 291 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 CYP11B1P15538 503 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 NCF2P19878 526 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 FUT3P21217 361 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 GNPDA1P46926 289 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 CEBPDP49716 269 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 SGSHP51688 502 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 HAND2P61296 217 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 NTHL1P78549 312 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 LRRC63Q05C16 580 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF528Q3MIS6 628 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 LGSNQ5TDP6 509 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 KCNIP4Q6PIL6 250 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 ATRAIDQ6UW56 229 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 ACOT1Q86TX2 421 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 CCDC50Q8IVM0 306 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 MTURNQ8N3F0 131 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 NECAB1Q8N987 351 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 TRPV1Q8NER1 839 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 STEAP2Q8NFT2 490 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 OR13C2Q8NGS9 318 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 OR2T34Q8NGX1 318 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 MAIP1Q8WWC4 291 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 TPD52L3Q96J77 140 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 C4orf36Q96KX1 117 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 MRPL13Q9BYD1 178 aaKnown RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 PKIBQ9C010 78 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 PORCNQ9H237 461 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 FAM114A2Q9NRY5 505 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 SMPD3Q9NY59 655 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 CRLS1Q9UJA2 301 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 CLEC4AQ9UMR7 237 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 RPH3ALQ9UNE2 315 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 RNF6Q9Y252 685 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 EIF3LQ9Y262 564 aaKnown RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 LRRK1Q38SD2 2015 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 DOCK3Q8IZD9 2030 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 RPAP1Q9BWH6 1393 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-210ENST00000553693 CHD7Q9P2D1 2997 aa2.45□□□□□ -2.02
SCFD1-210ENST00000553693 GRIN2DO15399 1336 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 MAST2Q6P0Q8 1798 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 WDFY4Q6ZS81 3184 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 MBLAC1A4D2B0 266 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 CTAGE15A4D2H0 777 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 TCP11X1B4DZS4 312 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 H0YL77 283 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 SGK1O00141 431 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 STX7O15400 261 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 RANBP6O60518 1105 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms