RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CHCHD2Q9Y6H1 151 aaPredicted RBP17.86■□□□□ 0.45
SSH1-209ENST00000551165 SPAARA0A1B0GVQ0 90 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 ANKUB1A6NFN9 424 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 BGLAPP02818 100 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 TMED10P49755 219 aaKnown RBP17.85■□□□□ 0.45
SSH1-209ENST00000551165 NUBP1P53384 320 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 STPG1Q5TH74 334 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 RNLSQ5VYX0 342 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 DPY19L2P2Q6ZN68 376 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 GRINAQ7Z429 371 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 ATCAYQ86WG3 371 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 GATAD2BQ8WXI9 593 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 SLC25A36Q96CQ1 311 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 NMNAT3Q96T66 252 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 TEAD3Q99594 435 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 EXOGQ9Y2C4 368 aaKnown RBP17.85■□□□□ 0.45
SSH1-209ENST00000551165 ASPMQ8IZT6 3477 aa17.85■□□□□ 0.45
SSH1-209ENST00000551165 MYL12BO14950 172 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 IL11P20809 199 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 SLC2A5P22732 501 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 UQCRC1P31930 480 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 RPS3AP61247 264 aaKnown RBP17.84■□□□□ 0.45
SSH1-209ENST00000551165 RPL18Q07020 188 aaKnown RBP17.84■□□□□ 0.45
SSH1-209ENST00000551165 ZNF468Q5VIY5 522 aaPredicted RBP17.84■□□□□ 0.45
SSH1-209ENST00000551165 ARHGAP11AQ6P4F7 1023 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 FAM98AQ8NCA5 519 aaKnown RBP17.84■□□□□ 0.45
SSH1-209ENST00000551165 TM9SF4Q92544 642 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 Q96M85 177 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 PPP4R1LQ9P1A2 415 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 FBXL2Q9UKC9 423 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 BAIAP2Q9UQB8 552 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 WIF1Q9Y5W5 379 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 ALPK2Q86TB3 2170 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 J3QRE1 110 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 NPIPB7O75200 414 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 TNFSF15O95150 251 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 IGF2P01344 180 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 MRPL3P09001 348 aaKnown RBP17.84■□□□□ 0.45
SSH1-209ENST00000551165 ZNF3P17036 446 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 RPS7P62081 194 aaKnown RBP17.84■□□□□ 0.45
SSH1-209ENST00000551165 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.84■□□□□ 0.45
SSH1-209ENST00000551165 IL10RAQ13651 578 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 TBX5Q99593 518 aa17.84■□□□□ 0.45
SSH1-209ENST00000551165 AIREO43918 545 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 MYL12AP19105 171 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 ATP6V1E1P36543 226 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 FOXF1Q12946 379 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 GID4Q8IVV7 300 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 TMEM99Q8N816 258 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 NPEPL1Q8NDH3 523 aa17.83■□□□□ 0.45
SSH1-209ENST00000551165 SECISBP2Q96T21 854 aaKnown RBP17.83■□□□□ 0.45
SSH1-209ENST00000551165 ZNF292O60281 2723 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 TRAV36DV7A0A075B6V5 113 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 TEX13CA0A0J9YWL9 993 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 LOC100506127A0A0U1RQW1 187 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 PNMA8CA0A1B0GUJ8 204 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 A0A1W2PQ72 361 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 OR6C68A6NDL8 312 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 EFNA2O43921 213 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 SLC25A12O75746 678 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 RAB40ALP0C0E4 278 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 ALG10Q5BKT4 473 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 B3GNTL1Q67FW5 361 aaPredicted RBP17.83■□□□□ 0.44
SSH1-209ENST00000551165 ATP6V1C2Q8NEY4 427 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 OR5M1Q8NGP8 315 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 DDOQ99489 341 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 CENPOQ9BU64 300 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 ANKRD10Q9NXR5 420 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 TNFRSF10DQ9UBN6 386 aa17.83■□□□□ 0.44
SSH1-209ENST00000551165 G3V3Y1 287 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 BCL10O95999 233 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 LALBAP00709 142 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 SCG5P05408 212 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 CTXN1P60606 82 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 PRPS1P60891 318 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 SSPNQ14714 243 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 TMEM44Q2T9K0 475 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 C1orf140Q5VVS0 124 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 FAM122BQ7Z309 247 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 RPS19BP1Q86WX3 136 aaKnown RBP17.82■□□□□ 0.44
SSH1-209ENST00000551165 WDSUB1Q8N9V3 476 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 ARL5BQ96KC2 179 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 GPX7Q96SL4 187 aaPredicted RBP17.82■□□□□ 0.44
SSH1-209ENST00000551165 CHCHD6Q9BRQ6 235 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 TAS2R5Q9NYW4 299 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 MED12Q93074 2177 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 IGHA1P01876 353 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 CCL3P10147 92 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 DLSTP36957 453 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 CDKN2AP42771 156 aaKnown RBP17.82■□□□□ 0.44
SSH1-209ENST00000551165 DNASE1L3Q13609 305 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 TMEM164Q5U3C3 297 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 C19orf48Q6RUI8 117 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 NANOGNBQ7Z5D8 188 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 SLC15A4Q8N697 577 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 ZFP41Q8N8Y5 198 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 ZNF485Q8NCK3 441 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 TIMP4Q99727 224 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 ERVK13-1Q9NX77 482 aa17.82■□□□□ 0.44
SSH1-209ENST00000551165 ZNF229Q9UJW7 825 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms