RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GPLD1P80108 840 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 MAB21L1Q13394 359 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 SF3A2Q15428 464 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC25A25Q6KCM7 469 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 DPY19L4Q7Z388 723 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 OR8S1Q8NH09 359 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 OR10A5Q9H207 317 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 KCNK15Q9H427 330 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 OBP2AQ9NY56 170 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 CLEC1BQ9P126 229 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 MGAT4AQ9UM21 535 aa12.54□□□□□ -0.4
PRPF40B-209ENST00000548825 OR5K3A6NET4 321 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 CHP2O43745 196 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 IGHA1P01876 353 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 ATP1B1P05026 303 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 CSN2P05814 226 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 SIRPAP78324 504 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 NPSR1Q6W5P4 371 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 TMPRSS12Q86WS5 348 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF676Q8N7Q3 588 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 FLVCR1-AS1Q8TAF5 88 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 BRIX1Q8TDN6 353 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 DNAJB12Q9NXW2 375 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF223Q9UK11 482 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 A0A0B4J2E0 115 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 A0A1B0GX12 115 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 COQ9O75208 318 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 RLN1P04808 185 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 THBS1P07996 1170 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 CXCL3P19876 107 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 FZD5Q13467 585 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 FGFBP1Q14512 234 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 GRM7Q14831 915 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 CD226Q15762 336 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 OR51Q1Q8NH59 317 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 NT5CQ8TCD5 201 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF649Q9BS31 505 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 SYT4Q9H2B2 425 aa12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 EXOGQ9Y2C4 368 aaKnown RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 TMEM184BQ9Y519 407 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-209ENST00000548825 EIF1AYO14602 144 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 KLF4O43474 513 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 HIST1H2ABP04908 130 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 RRAS2P62070 204 aaPredicted RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC25A30Q5SVS4 291 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 PRAMEF8Q5VWM4 474 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 PRAMEF7Q5VXH5 474 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 THOC7Q6I9Y2 204 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 ARHGAP11AQ6P4F7 1023 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 ULK3Q6PHR2 472 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 HIST3H2AQ7L7L0 130 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 LRRC28Q86X40 367 aaPredicted RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF485Q8NCK3 441 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 LSM14AQ8ND56 463 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 HIST1H2ACQ93077 130 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 TCF7L1Q9HCS4 588 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 MED17Q9NVC6 651 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 FKBP7Q9Y680 259 aa12.52□□□□□ -0.4
PRPF40B-209ENST00000548825 GPR179Q6PRD1 2367 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 NOTOA8MTQ0 251 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 FMO6PO60774 539 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 SLC19A2O60779 497 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF81P51508 661 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 NR0B1P51843 470 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 EIF2B5Q13144 721 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 HLA-DQA1Q5Y7H0 255 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 LUZP2Q86TE4 346 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 GPALPP1Q8IXQ4 340 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 MICU1Q9BPX6 476 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 ANKRD19PQ9H560 264 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 TRPV4Q9HBA0 871 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 POLHQ9Y253 713 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 CHURC1-FNTBB4DL54 471 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 OR6A2O95222 327 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 SLC35E2P0CK97 266 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 UQCRC1P31930 480 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 RAB38P57729 211 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 TM4SF19Q96DZ7 209 aa12.52□□□□□ -0.41
PRPF40B-209ENST00000548825 SNX18Q96RF0 628 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms