RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 LGALS2P05162 132 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 MRPL3P09001 348 aaKnown RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 NPIPA8P0DM63 369 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 EPB41P11171 864 aaKnown RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 NT5EP21589 574 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 KPNA2P52292 529 aaKnown RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 TP53I3Q53FA7 332 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 KLF17Q5JT82 389 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 TIGD3Q6B0B8 471 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 FAM71F2Q6NXP2 309 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 TMIGD1Q6UXZ0 262 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 RALGPS2Q86X27 583 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 OR4D9Q8NGE8 314 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 OR9G1Q8NH87 305 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 UBALD1Q8TB05 177 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 CTNNBL1Q8WYA6 563 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 FGF11Q92914 225 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 CEP170P1Q96L14 293 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 ZNF2Q9BSG1 426 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 THUMPD2Q9BTF0 503 aaKnown RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 EDEM2Q9BV94 578 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 ROGDIQ9GZN7 287 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 COQ10BQ9H8M1 238 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 FARSBQ9NSD9 589 aaKnown RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 TAS2R3Q9NYW6 316 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 NPIPA1Q9UND3 350 aa1.82□□□□□ -2.12
CCDC38-206ENST00000548771 AK6Q9Y3D8 172 aaKnown RBP1.82□□□□□ -2.12
CCDC38-206ENST00000548771 IGHV1OR21-1A0A087WYE8 117 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 RGSL1A5PLK6 1076 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 COLCA2A8K830 154 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 E9PBE3 544 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 DCTN6O00399 190 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 IFNB1P01574 187 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 PLEKP08567 350 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 ICAM2P13598 275 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 ZNF14P17017 642 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 CXCR2P25025 360 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 VDAC2P45880 294 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 PKNOX1P55347 436 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 KRTAP12-3P60328 96 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 HTD2P86397 168 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 TATDN3Q17R31 274 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 SLC25A52Q3SY17 297 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 CHRFAM7AQ494W8 412 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 GGTA1PQ4G0N0 100 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 BOLA3Q53S33 107 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 TMEM255AQ5JRV8 349 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 SAMD4BQ5PRF9 694 aaKnown RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 GPRC6AQ5T6X5 926 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 TPGS2Q68CL5 300 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 NCR3LG1Q68D85 454 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 C11orf71Q6IPW1 123 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 Q6ZN92 141 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 GRAMD2AQ8IUY3 354 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 MFSD6LQ8IWD5 586 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 C12orf56Q8IXR9 622 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 CCDC65Q8IXS2 484 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 RDH10Q8IZV5 341 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 CLEC4FQ8N1N0 589 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 C6orf223Q8N319 242 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 OR6C4Q8NGE1 309 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 OR2L8Q8NGY9 312 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 HTR3CQ8WXA8 447 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 FAM3CQ92520 227 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 ARPC1AQ92747 370 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 SEC22AQ96IW7 307 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 ZNF641Q96N77 438 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 CCNL2Q96S94 520 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 HDHD3Q9BSH5 251 aaPredicted RBP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 PLA2G12AQ9BZM1 189 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 ELOVL3Q9HB03 270 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 FOLH1BQ9HBA9 442 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 WFDC1Q9HC57 220 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.81□□□□□ -2.12
CCDC38-206ENST00000548771 SIGLEC8Q9NYZ4 499 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 STAP1Q9ULZ2 295 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 SH3TC1Q8TE82 1336 aa1.81□□□□□ -2.12
CCDC38-206ENST00000548771 IGLV2-18A0A075B6J9 118 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 IGKV1D-8A0A087WSZ0 117 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 LAD1O00515 517 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 AGPAT2O15120 278 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 MBTPS2O43462 519 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 UGT1A9O60656 530 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 BCAS1O75363 584 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-206ENST00000548771 STAMBPO95630 424 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 KLK3P07288 261 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-206ENST00000548771 CHTF8P0CG12 524 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 PNMA6AP0CW24 399 aaPredicted RBP1.8□□□□□ -2.12
CCDC38-206ENST00000548771 ATP6V1C1P21283 382 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 CALCRP30988 508 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 FMO3P31513 532 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 RFC4P35249 363 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 MDH1P40925 334 aaKnown RBP1.8□□□□□ -2.12
CCDC38-206ENST00000548771 TDO2P48775 406 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 CNTN2Q02246 1040 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 PIGGQ5H8A4 983 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 Q6ZR03 302 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 C6orf120Q7Z4R8 191 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 SLC26A11Q86WA9 606 aa1.8□□□□□ -2.12
CCDC38-206ENST00000548771 SLC35F2Q8IXU6 374 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms