RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	PTBP2	Q9UKA9	531 aa	Known RBP	2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	POMT2	Q9UKY4	750 aa		2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	NPIPA1	Q9UND3	350 aa		2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	CELA1	Q9UNI1	258 aa		2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	TMED5	Q9Y3A6	229 aa		2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	ALG6	Q9Y672	507 aa		2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	DNAJC13	O75165	2243 aa		2.82	□□□□□ -1.96
RPAP3-205	ENST00000548211	SON	P18583	2426 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211		A0A1B0GX78	115 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	NKX2-6	A6NCS4	301 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ANKRD61	A6NGH8	418 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	EEF2K	O00418	725 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	GMFG	O60234	142 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TOX	O94900	526 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	SMC2	O95347	1197 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	LCA5L	O95447	670 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	WDPCP	O95876	746 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	BCL10	O95999	233 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	RLN1	P04808	185 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	MELTF	P08582	738 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	FAM58BP	P0C7Q3	252 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	KRT3	P12035	628 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	NCF1	P14598	390 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	PFKFB1	P16118	471 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF24	P17028	368 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CMA1	P23946	247 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	PRDX3	P30048	256 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	SERPINB6	P35237	376 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ASMT	P46597	345 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ATP5O	P48047	213 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TRPC1	P48995	793 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CAMLG	P49069	296 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	KPNA2	P52292	529 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TMEM50B	P56557	158 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	DCDC1	P59894	354 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	HERV-K104	P61576	105 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CYCS	P99999	105 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	GABPB1	Q06547	395 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF33B	Q06732	778 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TFF3	Q07654	80 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	DMTN	Q08495	405 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	SLC10A7	Q0GE19	358 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	GAMT	Q14353	236 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	SLC25A35	Q3KQZ1	300 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CCDC14	Q49A88	953 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	FAM98B	Q52LJ0	330 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	BOLA3	Q53S33	107 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	HSP90B2P	Q58FF3	399 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TFDP3	Q5H9I0	405 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	C6orf136	Q5SQH8	315 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF658	Q5TYW1	1059 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	C1orf189	Q5VU69	101 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	FAM91A1	Q658Y4	838 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TXNRD3NB	Q6F5E7	133 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ANGPTL8	Q6UXH0	198 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	NLRP9	Q7RTR0	991 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	RTN4RL2	Q86UN3	420 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF677	Q86XU0	584 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	DOLPP1	Q86YN1	238 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	LRRC49	Q8IUZ0	686 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TIGD4	Q8IY51	512 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ABHD12	Q8N2K0	398 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ATPAF2	Q8N5M1	289 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TRAM1L1	Q8N609	369 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CCDC185	Q8N715	623 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TTC29	Q8NA56	475 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CCNY	Q8ND76	341 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	NUP37	Q8NFH4	326 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	OR4E2	Q8NGC2	313 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	OR2AJ1	Q8NGZ0	328 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CFAP61	Q8NHU2	1237 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	PHLDA1	Q8WV24	401 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	PIH1D2	Q8WWB5	315 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	GIMAP1	Q8WWP7	306 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	LCN9	Q8WX39	176 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	LPGAT1	Q92604	370 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF75CP	Q92670	426 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	C5orf30	Q96GV9	206 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	DHTKD1	Q96HY7	919 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CELF6	Q96J87	481 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF830	Q96NB3	372 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	GSDMA	Q96QA5	445 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	VPS35	Q96QK1	796 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	LYSMD1	Q96S90	227 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ERP44	Q9BS26	406 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TUBGCP2	Q9BSJ2	902 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CCM2	Q9BSQ5	444 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ACPT	Q9BZG2	426 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	RTN4R	Q9BZR6	473 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TRIM7	Q9C029	511 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	SLC39A8	Q9C0K1	460 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	POLR1E	Q9GZS1	481 aa	Known RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	KIR3DX1	Q9H7L2	352 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	COQ10B	Q9H8M1	238 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ZNF160	Q9HCG1	818 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	ACP6	Q9NPH0	428 aa		2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	TEX10	Q9NXF1	929 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	CRNN	Q9UBG3	495 aa	Predicted RBP	2.81	□□□□□ -1.96
RPAP3-205	ENST00000548211	B4GALT7	Q9UBV7	327 aa		2.81	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms