RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SLC35F1Q5T1Q4 408 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 C1orf140Q5VVS0 124 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 NIPAL3Q6P499 406 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.45
PTCH1-215ENST00000547672 JAZF1Q86VZ6 243 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 ADGRG3Q86Y34 549 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 GALNT15Q8N3T1 639 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 KLHL36Q8N4N3 616 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 ACBD7Q8N6N7 88 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 SCAIQ8N9R8 606 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 POMGNT2Q8NAT1 580 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 SLC37A3Q8NCC5 494 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 OR52N1Q8NH53 320 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 MFSD8Q8NHS3 518 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 ZFAND2BQ8WV99 257 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 PMEPA1Q969W9 287 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 ZBTB8AQ96BR9 441 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 FER1L6-AS2Q96M78 137 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 FRMD6Q96NE9 622 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 TEAD3Q99594 435 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 ANGPTL4Q9BY76 406 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 SIAEQ9HAT2 523 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 HINT3Q9NQE9 182 aaKnown RBP12.21□□□□□ -0.45
PTCH1-215ENST00000547672 TOR4AQ9NXH8 423 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 AIREO43918 545 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 RENP00797 406 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 TSPAN19P0C672 248 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 HSMCR30P0CW71 290 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 PRKCAP17252 672 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 SDHAP31040 664 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 UGT2B10P36537 528 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 SOX3P41225 446 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 SLC25A1P53007 311 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 WNT4P56705 351 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 RPS7P62081 194 aaKnown RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 TCF15Q12870 199 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 SGCBQ16585 318 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 DGUOKQ16854 277 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 GLYR1Q49A26 553 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 KLHL12Q53G59 568 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 IL20RBQ6UXL0 311 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 C16orf47Q6ZP98 133 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 PLCZ1Q86YW0 608 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 KBTBD8Q8NFY9 601 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 OR10G3Q8NGC4 313 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 OR52E2Q8NGJ4 325 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 PAQR8Q8TEZ7 354 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 TAAR8Q969N4 342 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 KTI12Q96EK9 354 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 SNX18Q96RF0 628 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 RHNO1Q9BSD3 238 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 RTN4RQ9BZR6 473 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 PARD6AQ9NPB6 346 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 P4HTMQ9NXG6 502 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 MED11Q9P086 117 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 IL20RAQ9UHF4 553 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 FBXL4Q9UKA2 621 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 CAB39Q9Y376 341 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-215ENST00000547672 HEATR5AQ86XA9 2040 aa12.2□□□□□ -0.46
PTCH1-215ENST00000547672 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-215ENST00000547672 LAMA1P25391 3075 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 DAPL1A0PJW8 107 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 XKRYO14609 159 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 SEC14L5O43304 696 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 NPIPB7O75200 414 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 PTHP01270 115 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 IGHA1P01876 353 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 BGLAPP02818 100 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 P04436 131 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 PTNP21246 168 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 MST1P26927 711 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 UQCRC1P31930 480 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 CASRP41180 1078 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 RPS5P46782 204 aaKnown RBP12.19□□□□□ -0.46
PTCH1-215ENST00000547672 SLC16A1P53985 500 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 MLLT10P55197 1068 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 CTXN1P60606 82 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 BDH1Q02338 343 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 HSF2Q03933 536 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 EGR4Q05215 589 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 ACSM1Q08AH1 577 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 ZP4Q12836 540 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 NFATC3Q12968 1075 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 GPR50Q13585 617 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 FHL1Q13642 323 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 ADCK1Q86TW2 530 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 LRRC17Q8N6Y2 441 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 OR2M3Q8NG83 312 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 HAVCR2Q8TDQ0 301 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 PTP4A1Q93096 173 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 MNTQ99583 582 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 COQ7Q99807 217 aa12.19□□□□□ -0.46
PTCH1-215ENST00000547672 KATNB1Q9BVA0 655 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms