RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ACKR4Q9NPB9 350 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 SERINC1Q9NRX5 453 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 CHRNA9Q9UGM1 479 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 RRP15Q9Y3B9 282 aaKnown RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 TMEM72A0PK05 275 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 H3BNX3 289 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 DEAF1O75398 565 aaPredicted RBP10.84□□□□□ -0.67
HDAC7-226ENST00000547259 CTAG2O75638 210 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 THY1P04216 161 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 PEPDP12955 493 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 IL11P20809 199 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 PTNP21246 168 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 FASP25445 335 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 SMIM11AP58511 58 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 B3GALT5-AS1P59052 145 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 TTC33Q6PID6 262 aaPredicted RBP10.84□□□□□ -0.67
HDAC7-226ENST00000547259 NKAIN4Q8IVV8 208 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 OR52J3Q8NH60 311 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 NEIL3Q8TAT5 605 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 SLC38A4Q969I6 547 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 ANKRD19PQ9H560 264 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 NMNAT1Q9HAN9 279 aaPredicted RBP10.84□□□□□ -0.67
HDAC7-226ENST00000547259 DNAJB9Q9UBS3 223 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 ST6GALNAC2Q9UJ37 374 aa10.84□□□□□ -0.67
HDAC7-226ENST00000547259 SAMHD1Q9Y3Z3 626 aaKnown RBP10.84□□□□□ -0.67
HDAC7-226ENST00000547259 A0A087WUJ7 227 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 GJE1A6NN92 205 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 AHRRA9YTQ3 701 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 H0Y3Z8 333 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 LINC01387J3KSC0 135 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 TNFRSF11BO00300 401 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 DVL2O14641 736 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 CLOCKO15516 846 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ZNF208O43345 1280 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 E2F6O75461 281 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 GOSR1O95249 250 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 LYPD3O95274 346 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ACTL6AO96019 429 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 TFPIP10646 304 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 CHMP24386 653 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 SFTPDP35247 375 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 GFRA1P56159 465 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ATP6AP1Q15904 470 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 EXOC3L2Q2M3D2 409 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 WDR88Q6ZMY6 472 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 LSRQ86X29 649 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ADGRG3Q86Y34 549 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 LILRA2Q8N149 483 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 RPRMLQ8N4K4 120 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 FAM222BQ8WU58 562 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 SLC25A43Q8WUT9 341 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-226ENST00000547259 TMEM255BQ8WV15 326 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 TMEM239Q8WW34 195 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 LRTOMTQ8WZ04 291 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ABTB1Q969K4 478 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-226ENST00000547259 DDIT4LQ96D03 193 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 DHRS1Q96LJ7 313 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ALPK1Q96QP1 1244 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 PRSS27Q9BQR3 290 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 CLEC4MQ9H2X3 399 aaPredicted RBP10.83□□□□□ -0.68
HDAC7-226ENST00000547259 MAN2C1Q9NTJ4 1040 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ALKBH4Q9NXW9 302 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 STOML1Q9UBI4 398 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 Q9UFV3 132 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 TMCC3Q9ULS5 477 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 ZNF337Q9Y3M9 751 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 LYVE1Q9Y5Y7 322 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 AP4B1Q9Y6B7 739 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 U3KQV3 271 aa10.83□□□□□ -0.68
HDAC7-226ENST00000547259 A0A1W2PRQ8 180 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 A8MVM7 634 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 KPNA4O00629 521 aaPredicted RBP10.82□□□□□ -0.68
HDAC7-226ENST00000547259 SEC14L5O43304 696 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 EFNA2O43921 213 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 BAG2O95816 211 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 OPN1LWP04000 364 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 BMP7P18075 431 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 KLK2P20151 261 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 FUT4P22083 530 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 RBM34P42696 430 aaKnown RBP10.82□□□□□ -0.68
HDAC7-226ENST00000547259 STARP49675 285 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 MAP2K6P52564 334 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 UGT2B15P54855 530 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 RAC1P63000 192 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 PPP1R8Q12972 351 aaKnown RBP10.82□□□□□ -0.68
HDAC7-226ENST00000547259 DGCR6Q14129 220 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 RCN1Q15293 331 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 SYT14P1Q58G82 188 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 NHSL2Q5HYW2 709 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 DCST1Q5T197 706 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 RTL6Q6ICC9 239 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 ZNF730Q6ZMV8 503 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 RRM2BQ7LG56 351 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 KIF18BQ86Y91 864 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 P3H2Q8IVL5 708 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 UBQLNLQ8IYU4 475 aa10.82□□□□□ -0.68
HDAC7-226ENST00000547259 ACOT11Q8WXI4 607 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms