RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MEPEQ9NQ76 525 aaPredicted RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 OR5V1Q9UGF6 321 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 NID1P14543 1247 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 MAPK3P27361 379 aaPredicted RBP13.06□□□□□ -0.32
SRP54-202ENST00000546080 ERVFC1P60507 584 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 BTN3A2P78410 334 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 NTHL1P78549 312 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 FLI1Q01543 452 aaPredicted RBP13.06□□□□□ -0.32
SRP54-202ENST00000546080 MELKQ14680 651 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 RBMS2Q15434 407 aaKnown RBP13.06□□□□□ -0.32
SRP54-202ENST00000546080 C2orf68Q2NKX9 166 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 MTSS1LQ765P7 747 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 PXT1Q8NFP0 134 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 OR8D1Q8WZ84 308 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 ST8SIA2Q92186 375 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 MRPL48Q96GC5 212 aaKnown RBP13.06□□□□□ -0.32
SRP54-202ENST00000546080 TNFRSF13CQ96RJ3 184 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 MRI1Q9BV20 369 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 ZNF350Q9GZX5 532 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 HPF1Q9NWY4 346 aa13.06□□□□□ -0.32
SRP54-202ENST00000546080 APOBEC3BQ9UH17 382 aaKnown RBP13.06□□□□□ -0.32
SRP54-202ENST00000546080 PRAMEF2O60811 474 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 TMEM127O75204 238 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 RLN1P04808 185 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 CALCBP10092 127 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 TSFMP43897 325 aaKnown RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 ART1P52961 327 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 RPS15P62841 145 aaKnown RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 DEFA5Q01523 94 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 MLF2Q15773 248 aaPredicted RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 OR7E24Q6IFN5 339 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 SLC36A1Q7Z2H8 476 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 OR2AK2Q8NG84 335 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 OR4K13Q8NH42 304 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 NSMAFQ92636 917 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 ARSGQ96EG1 525 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 INSM2Q96T92 566 aaPredicted RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 LGR4Q9BXB1 951 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 SAV1Q9H4B6 383 aaPredicted RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 NCDNQ9UBB6 729 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 ICAM5Q9UMF0 924 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 HTTP42858 3142 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 HEATR5BQ9P2D3 2071 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 PEX12O00623 359 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 IGF2P01344 180 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 RLN2P04090 185 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 RPS4Y1P22090 263 aaKnown RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 CDK3Q00526 305 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 GGTLC2Q14390 218 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 STK11Q15831 433 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 ZNF77Q15935 545 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 TMEM52BQ4KMG9 183 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 STPG1Q5TH74 334 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 OR5T2Q8NGG2 359 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 OR6K3Q8NGY3 331 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 MIB2Q96AX9 1013 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 SEMA4CQ9C0C4 833 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 MFFQ9GZY8 342 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 TMEM27Q9HBJ8 222 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 ABT1Q9ULW3 272 aaKnown RBP13.05□□□□□ -0.32
SRP54-202ENST00000546080 ZNF281Q9Y2X9 895 aa13.05□□□□□ -0.32
SRP54-202ENST00000546080 RNGTTO60942 597 aaKnown RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 LILRB3O75022 631 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 CBX7O95931 251 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 CXCL10P02778 98 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 HIST1H1CP16403 213 aaKnown RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 LAG3P18627 525 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 MNDAP41218 407 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 MAGEB1P43366 347 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 GRM7Q14831 915 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 RPE65Q16518 533 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 CSRP2Q16527 193 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 PCGF3Q3KNV8 242 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 LHX8Q68G74 356 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 OR2L13Q8N349 312 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 RELL2Q8NC24 303 aaPredicted RBP13.04□□□□□ -0.32
SRP54-202ENST00000546080 TMIEQ8NEW7 156 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 OR2L8Q8NGY9 312 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 TNFAIP8L1Q8WVP5 186 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 C10orf90Q96M02 699 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 SLITRK2Q9H156 845 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 TMEM138Q9NPI0 162 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 PLCL2Q9UPR0 1127 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 ABCD4O14678 606 aa13.04□□□□□ -0.32
SRP54-202ENST00000546080 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms