RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ACER3Q9NUN7 267 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ARGLU1Q9NWB6 273 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 C14orf119Q9NWQ9 140 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 THUMPD1Q9NXG2 353 aaKnown RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 KLHL28Q9NXS3 571 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CALML5Q9NZT1 146 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 KLHL9Q9P2J3 617 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 P2RX2Q9UBL9 471 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CHRNA9Q9UGM1 479 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CLEC4AQ9UMR7 237 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 PLEKHA6Q9Y2H5 1048 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 SPIN1Q9Y657 262 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 FLNAP21333 2647 aaKnown RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF469Q96JG9 3925 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 A0A1W2PPR1 153 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 FAM234BA2RU67 622 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 DEFB108AA8MXU0 73 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 FAAHO00519 579 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 DNPH1O43598 174 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 BCAS1O75363 584 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ANP32DO95626 131 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 C1QCP02747 245 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 DBIP07108 87 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 NR2F1P10589 423 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 UQCRBP14927 111 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 H2AFXP16104 143 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 PSMB1P20618 241 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 FKBP2P26885 142 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 APEX1P27695 318 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 APOBEC1P41238 236 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 HTR3AP46098 478 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 DIO1P49895 249 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 POLR2JP52435 117 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 CRISP3P54108 245 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 SCAND1P57086 179 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 STX1BP61266 288 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 CSNK2A1P68400 391 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 IRX1P78414 480 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 MERTKQ12866 999 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 FADDQ13158 208 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 GNA13Q14344 377 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 SYPL1Q16563 259 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 CR1LQ2VPA4 569 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 C6orf10Q5SRN2 563 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 MRPL2Q5T653 305 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 RNF220Q5VTB9 566 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ABLIM2Q6H8Q1 611 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 TFAP2EQ6VUC0 442 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 PEX5LQ8IYB4 626 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ARFGAP2Q8N6H7 521 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ANKFN1Q8N957 763 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF563Q8TA94 476 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 PNPT1Q8TCS8 783 aaKnown RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 WDR60Q8WVS4 1066 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 STON2Q8WXE9 905 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ROBO4Q8WZ75 1007 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ZG16BQ96DA0 208 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 OR5B2Q96R09 309 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 PSD2Q9BQI7 771 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 CCDC106Q9BWC9 280 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 LIME1Q9H400 295 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ZMAT4Q9H898 229 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 TPT1P8Q9HAU6 139 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 SLCO1B3Q9NPD5 702 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 SLC6A13Q9NSD5 602 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 CCM2LQ9NUG4 571 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM45AQ9NWC5 275 aa6.82□□□□□ -1.32
SNHG1-223ENST00000545440 ACANP16112 2415 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CDHR4A6H8M9 788 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM247A6NEH6 219 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CLDN24A6NM45 220 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF724A8MTY0 619 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 SULT2B1O00204 365 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 SMAD9O15198 467 aaKnown RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CYTIPO60759 359 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CNOT4O95628 575 aaKnown RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 PMS2P2O95744 297 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 BCHEP06276 602 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 FESP07332 822 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 YES1P07947 543 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 IL7RP16871 459 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 HOXB9P17482 250 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ENPP1P22413 925 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 MAP2K6P52564 334 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 DSTNP60981 165 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 KEAP1Q14145 624 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 MAPK11Q15759 364 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ZSWIM7Q19AV6 140 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 EXOC3L2Q2M3D2 409 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 LIN52Q52LA3 116 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 PRAMEF8Q5VWM4 474 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 PRAMEF7Q5VXH5 474 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 STAC2Q6ZMT1 411 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 CXXC5Q7LFL8 322 aaKnown RBP6.81□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF550Q7Z398 422 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 HMGN2P46Q86SG4 172 aa6.81□□□□□ -1.32
SNHG1-223ENST00000545440 TUSC5Q8IXB3 177 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms