RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	GPRIN2	O60269	458 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	CREBL2	O60519	120 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	NDUFB2	O95178	105 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	GIP	P09681	153 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	DHODH	Q02127	395 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	LGALS3BP	Q08380	585 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	EXOSC6	Q5RKV6	272 aa	Known RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	TMEM69	Q5SWH9	247 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	ZC3H14	Q6PJT7	736 aa	Known RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	OR14A16	Q8NHC5	309 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	PHYHIP	Q92561	330 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	SMARCD2	Q92925	531 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF707	Q96C28	371 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	LINC00052	Q96N35	136 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	CFHR5	Q9BXR6	569 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	C2orf42	Q9NWW7	574 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	SDHAF2	Q9NX18	166 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	FOXJ3	Q9UPW0	622 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	HEBP2	Q9Y5Z4	205 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838		V9GY05	133 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	ANKRD20A5P	A0PJZ0	165 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	MCIDAS	D6RGH6	385 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	FGF17	O60258	216 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	HOXD4	P09016	255 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	SMIM10L1	P0DMW3	83 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	CPN1	P15169	458 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	NFYA	P23511	347 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	PTH2R	P49190	550 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	EMD	P50402	254 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	BAMBI	Q13145	260 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	GGTLC2	Q14390	218 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	FAM78A	Q5JUQ0	283 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	OR5M10	Q6IEU7	315 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	GRAMD2A	Q8IUY3	354 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	EID2	Q8N6I1	236 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	OR6K6	Q8NGW6	343 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	WDR89	Q96FK6	387 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	SMIM10	Q96HG1	83 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	HSPA12B	Q96MM6	686 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	REG4	Q9BYZ8	158 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	GPN1	Q9HCN4	374 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	TAS2R5	Q9NYW4	299 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	ADAM18	Q9Y3Q7	739 aa		11.87	□□□□□ -0.51
DDX11-223	ENST00000542838	TRBV23OR9-2	A0A075B6M9	112 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	IMPA2	O14732	288 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	SULT1B1	O43704	296 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	KCNJ13	O60928	360 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	ADAM11	O75078	769 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	AK1	P00568	194 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	CT62	P0C5K7	136 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	AK4	P27144	223 aa	Predicted RBP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	DCTD	P32321	178 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	RPL4	P36578	427 aa	Known RBP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	RAP2B	P61225	183 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	PPP2CB	P62714	309 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	PPP2CA	P67775	309 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	PDGFRL	Q15198	375 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	STPG1	Q5TH74	334 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	OLFML2A	Q68BL7	652 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	WBP1	Q96G27	269 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	MRPL48	Q96GC5	212 aa	Known RBP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF281	Q9Y2X9	895 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	PCDHGA5	Q9Y5G8	931 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838		A0A087WV62	115 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	URAD	A6NGE7	173 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	BET1	O15155	118 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	FKTN	O75072	461 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	EML2	O95834	649 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	ZP3	P21754	424 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	GRPR	P30550	384 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	RBM34	P42696	430 aa	Known RBP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	DIO1	P49895	249 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	MNX1	P50219	401 aa	Predicted RBP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	P2RX1	P51575	399 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	ILF3	Q12906	894 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF626	Q68DY1	528 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	KCTD20	Q7Z5Y7	419 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	TMEM52	Q8NDY8	209 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	SPPL3	Q8TCT6	385 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	THEM6	Q8WUY1	208 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	TM4SF19	Q96DZ7	209 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	OR2A5	Q96R48	311 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	MYADM	Q96S97	322 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	NMNAT3	Q96T66	252 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	ZNF426	Q9BUY5	554 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	SRMS	Q9H3Y6	488 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	C12orf4	Q9NQ89	552 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	OR5V1	Q9UGF6	321 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	FBXL3	Q9UKT7	428 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	CA5B	Q9Y2D0	317 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	KCNMB2	Q9Y691	235 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	SESN1	Q9Y6P5	492 aa		11.86	□□□□□ -0.51
DDX11-223	ENST00000542838	MCRIP1	C9JLW8	97 aa		11.85	□□□□□ -0.51
DDX11-223	ENST00000542838	CTSV	O60911	334 aa		11.85	□□□□□ -0.51
DDX11-223	ENST00000542838	SERPINI2	O75830	405 aa		11.85	□□□□□ -0.51
DDX11-223	ENST00000542838	CCL5	P13501	91 aa		11.85	□□□□□ -0.51
DDX11-223	ENST00000542838	POU3F2	P20265	443 aa	Predicted RBP	11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms