RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 ABHD12BQ7Z5M8 362 aaPredicted RBP12.53□□□□□ -0.4
COPS7A-212ENST00000541866 VRK2Q86Y07 508 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 TMEM99Q8N816 258 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 POMGNT2Q8NAT1 580 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 ITCHQ96J02 903 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 SF3B5Q9BWJ5 86 aaKnown RBP12.53□□□□□ -0.4
COPS7A-212ENST00000541866 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 PMF1-BGLAPU3KQ54 211 aa12.53□□□□□ -0.4
COPS7A-212ENST00000541866 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 TMEM120BA0PK00 339 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 CDHR4A6H8M9 788 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 LIPT2A6NK58 231 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 BCHEP06276 602 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 ETFAP13804 333 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.41
COPS7A-212ENST00000541866 DSTNP60981 165 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 C1QTNF12Q5T7M4 302 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 C11orf71Q6IPW1 123 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 HMBOX1Q6NT76 420 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 SLC38A5Q8WUX1 472 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 TMEM45BQ96B21 275 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 AURKBQ96GD4 344 aaPredicted RBP12.52□□□□□ -0.41
COPS7A-212ENST00000541866 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 PIF1Q9H611 641 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 TPT1P8Q9HAU6 139 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 TMEM45AQ9NWC5 275 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
COPS7A-212ENST00000541866 NKIRAS1Q9NYS0 192 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 RAB21Q9UL25 225 aa12.52□□□□□ -0.41
COPS7A-212ENST00000541866 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 ANK3Q12955 4377 aaKnown RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 A0A0G2JPF8 293 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 AQP7P3A6NL99 342 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 A8MVM7 634 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 HNRNPCL3B7ZW38 293 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 HNRNPCL4P0DMR1 293 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 APOBEC3AP31941 199 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 BNIP2Q12982 314 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 MAPK11Q15759 364 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 C6orf10Q5SRN2 563 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 PODNL1Q6PEZ8 512 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF836Q6ZNA1 936 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 CXXC5Q7LFL8 322 aaKnown RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 HIPK1Q86Z02 1210 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 HTRA1Q92743 480 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 KCNS3Q9BQ31 491 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 MANSC1Q9H8J5 431 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 ZIM2Q9NZV7 527 aa12.51□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF443Q9Y2A4 671 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-212ENST00000541866 H7C417 338 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 KLF11O14901 512 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 UBDO15205 165 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 GPRIN2O60269 458 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 SNNO75324 88 aaPredicted RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 VAMP5O95183 116 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 POLR2JP52435 117 aaKnown RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 UBE2NP61088 152 aaKnown RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 CHRFAM7AQ494W8 412 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 C1orf140Q5VVS0 124 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 PRAMEF8Q5VWM4 474 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 PRAMEF7Q5VXH5 474 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 LSRQ86X29 649 aaPredicted RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 MIER2Q8N344 545 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 SPATA3Q8NHX4 192 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 FAM168AQ92567 244 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 TNFRSF13CQ96RJ3 184 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 SLC6A13Q9NSD5 602 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 MOKQ9UQ07 419 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 IFT52Q9Y366 437 aa12.5□□□□□ -0.41
COPS7A-212ENST00000541866 CHD3Q12873 2000 aaKnown RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 HEATR1Q9H583 2144 aaKnown RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 FBN1P35555 2871 aaKnown RBP12.5□□□□□ -0.41
COPS7A-212ENST00000541866 DSPPQ9NZW4 1301 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 A0A096LPI6 279 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 OR6C65A6NJZ3 312 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF587BE7ETH6 402 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 ATP6V1G2-DDX39BF2Z307 99 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 AHSA1O95433 338 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SLC25A16P16260 332 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 PAX7P23759 505 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 GTF2E2P29084 291 aaKnown RBP12.49□□□□□ -0.41
COPS7A-212ENST00000541866 EFNA4P52798 201 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 MVDP53602 400 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SLC18A1P54219 525 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SLC25A3Q00325 362 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SLC9B1Q4ZJI4 515 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms